Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   RX793_RS02465 Genome accession   NZ_CP136263
Coordinates   651343..651807 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain 0039     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 646343..656807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RX793_RS02440 (RX793_02440) - 646857..647402 (-) 546 Protein_487 hypothetical protein -
  RX793_RS02445 (RX793_02445) fadH 647512..648276 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  RX793_RS02450 (RX793_02450) - 648420..649283 (+) 864 WP_024085238.1 metallophosphoesterase -
  RX793_RS02455 (RX793_02455) - 649358..649852 (+) 495 WP_088037173.1 L,D-transpeptidase family protein -
  RX793_RS02460 (RX793_02460) - 649928..651220 (+) 1293 WP_024085236.1 MFS transporter -
  RX793_RS02465 (RX793_02465) kre 651343..651807 (+) 465 WP_003154622.1 YkyB family protein Regulator
  RX793_RS02470 (RX793_02470) cheV 651850..652761 (-) 912 WP_007409609.1 chemotaxis protein CheV -
  RX793_RS02475 (RX793_02475) - 652950..653111 (+) 162 WP_007409608.1 hypothetical protein -
  RX793_RS02480 (RX793_02480) - 653312..654531 (+) 1220 Protein_495 aminotransferase A -
  RX793_RS02485 (RX793_02485) - 654507..656327 (-) 1821 WP_015417363.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=889953 RX793_RS02465 WP_003154622.1 651343..651807(+) (kre) [Bacillus velezensis strain 0039]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=889953 RX793_RS02465 WP_003154622.1 651343..651807(+) (kre) [Bacillus velezensis strain 0039]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929