Detailed information NTG0088992

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABK31_RS00290
• Genome accession: NZ_AP027679
• Coordinates: 45590..46615 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain PSS-08-2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 40590..51615

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABK31_RS00260 (VEE22_00480)	zapB	40674..40919 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
AABK31_RS00265 (VEE22_00490)	rraA	41004..41489 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABK31_RS00270 (VEE22_00500)	menA	41582..42508 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABK31_RS00275 (VEE22_00510)	hslU	42575..43906 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABK31_RS00280 (VEE22_00520)	hslV	43916..44446 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABK31_RS00285 (VEE22_00530)	ftsN	44539..45498 (-)	960	WP_000068828.1	cell division protein FtsN	-
AABK31_RS00290 (VEE22_00540)	cytR	45590..46615 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABK31_RS00295 (VEE22_00550)	priA	46771..48969 (-)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
AABK31_RS00300 (VEE22_00560)	rpmE	49172..49384 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
AABK31_RS00305 (VEE22_00570)	yiiX	49445..50053 (-)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABK31_RS00310 (VEE22_00580)	metJ	50237..50554 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=88992 AABK31_RS00290 WP_000644904.1 45590..46615(-) (cytR) [Escherichia coli strain PSS-08-2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=88992 AABK31_RS00290 WP_000644904.1 45590..46615(-) (cytR) [Escherichia coli strain PSS-08-2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628