Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RWT08_RS16740 Genome accession   NZ_CP136247
Coordinates   3635931..3636332 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain STEN00241     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3630931..3641332
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RWT08_RS16725 (RWT08_16725) - 3632942..3634978 (-) 2037 WP_317657650.1 methyl-accepting chemotaxis protein -
  RWT08_RS16730 (RWT08_16730) - 3635020..3635550 (-) 531 WP_107231808.1 chemotaxis protein CheW -
  RWT08_RS16735 (RWT08_16735) - 3635550..3635912 (-) 363 WP_057498588.1 response regulator -
  RWT08_RS16740 (RWT08_16740) pilG 3635931..3636332 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  RWT08_RS16745 (RWT08_16745) gshB 3636573..3637520 (+) 948 WP_107231807.1 glutathione synthase -
  RWT08_RS16750 (RWT08_16750) - 3637520..3638404 (+) 885 WP_249843152.1 energy transducer TonB -
  RWT08_RS16755 (RWT08_16755) tsaB 3638918..3639631 (-) 714 WP_249843151.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=889790 RWT08_RS16740 WP_005418455.1 3635931..3636332(-) (pilG) [Stenotrophomonas maltophilia strain STEN00241]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=889790 RWT08_RS16740 WP_005418455.1 3635931..3636332(-) (pilG) [Stenotrophomonas maltophilia strain STEN00241]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAGGCGCTTGCGAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTGATCATGCTGTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACCAAGCCTTTCACGCGCGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677