Detailed information NTG0889609

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RUQ52_RS09975
• Genome accession: NZ_CP136182
• Coordinates: 2122917..2123618 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain ABO21-A002
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2117917..2128618

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RUQ52_RS09945 (RUQ52_09945)	-	2118223..2118666 (-)	444	WP_001246675.1	SRPBCC family protein	-
RUQ52_RS09950 (RUQ52_09950)	tadA	2118736..2119239 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
RUQ52_RS09955 (RUQ52_09955)	-	2119246..2120370 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
RUQ52_RS09960 (RUQ52_09960)	ung	2120367..2121080 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
RUQ52_RS09965 (RUQ52_09965)	-	2121131..2121727 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
RUQ52_RS09970 (RUQ52_09970)	gspK	2121958..2122917 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
RUQ52_RS09975 (RUQ52_09975)	xcpW	2122917..2123618 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RUQ52_RS09980 (RUQ52_09980)	xcpV	2123618..2123998 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
RUQ52_RS09985 (RUQ52_09985)	-	2123988..2124542 (-)	555	WP_000841373.1	type II secretion system protein	-
RUQ52_RS09990 (RUQ52_09990)	-	2124552..2125160 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RUQ52_RS09995 (RUQ52_09995)	-	2125198..2125971 (-)	774	WP_000497298.1	TatD family hydrolase	-
RUQ52_RS10000 (RUQ52_10000)	-	2125989..2126330 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
RUQ52_RS10005 (RUQ52_10005)	-	2126342..2127322 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
RUQ52_RS10010 (RUQ52_10010)	kdsB	2127334..2128095 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=889609 RUQ52_RS09975 WP_000594589.1 2122917..2123618(-) (xcpW) [Acinetobacter baumannii strain ABO21-A002]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=889609 RUQ52_RS09975 WP_000594589.1 2122917..2123618(-) (xcpW) [Acinetobacter baumannii strain ABO21-A002]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996