Detailed information NTG0088957

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCU28_RS09105
• Genome accession: NZ_AP024871
• Coordinates: 1963168..1966548 (+)
• Length: 1126 a.a.
• NCBI ID: WP_261815893.1
• Uniprot ID: -
• Organism: Vibrio gallicus strain CIP 107863
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1958168..1971548

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU28_RS09085	erpA	1959015..1959356 (-)	342	WP_261815889.1	iron-sulfur cluster insertion protein ErpA	-
OCU28_RS09090	hemL	1959553..1960836 (+)	1284	WP_261815890.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCU28_RS09095	-	1960929..1962014 (+)	1086	WP_261815891.1	AI-2E family transporter	-
OCU28_RS09100	rsmC	1962030..1963049 (+)	1020	WP_261815892.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCU28_RS09105	chiS	1963168..1966548 (+)	3381	WP_261815893.1	response regulator	Regulator
OCU28_RS09110	-	1966992..1967132 (-)	141	WP_261815894.1	hypothetical protein	-
OCU28_RS09115	-	1967170..1968843 (+)	1674	WP_261815895.1	ABC transporter substrate-binding protein	-
OCU28_RS09120	-	1968974..1969960 (+)	987	WP_261815896.1	ABC transporter permease	-
OCU28_RS09125	-	1969963..1970991 (+)	1029	WP_261815897.1	ABC transporter permease	-

Sequence

Protein

• Length: 1126 a.a.
• Molecular weight: 127520.52 Da
• Isoelectric Point: 6.0662

>NTDB_id=88957 OCU28_RS09105 WP_261815893.1 1963168..1966548(+) (chiS) [Vibrio gallicus strain CIP 107863]
MAQNSTTPKFKSIKSNLMAIFLIVSLTPMLIVGYFFLRAHSLDLTEQSTQYLIAARNGASQKVSTYFNNLDAEVVGFVHS
ELAYSSGGRFYGLIDGFRRLGKTIEQSREIGQKRYVPGTSAVLSQPTVRNSANFVGVERYRLIHDRYHSTYLDLLQRSDF
DDILLVDLDGNVAYSTLKNDYFATNLDSGRYQSSQLGKLFDSLKASMSNKQKDLLKYNDLVLMSDFSRATGTDIKQRVVW
FASPIIQQGHLHSYAFMRLPIERLKSIITDDSANNVSILLLDQYQNLLSGNPEHVEEISALQQHKSSVDITQYTDDNNAI
MMASFSPLEIHGMLWSIFSQSPEELAFARVSNLQKLFIGIIIVALILVFITSHYLANLITRPLLKLTWAAERISAGDLAE
EVEGAQRKDEIGRLAVSFARMQRSVREKIALIEHQNQELEYNLQTIAKQNQDLQSADKLKDEFLATTSHELRTPLHGMIG
VAQTLLSGAHGNVPSAQCFQLEIIINSGNRLSNLVDDLLDYHKMRYGDLKLEHHAVSVASSAQLVVELSNHLIVNKPVRL
LNHIDPRLPMVSADPQRLEQVLYNLIGNAIKFTNEGKVVLNATQEAEQLVIEVIDTGRGIPEQDLATIFEPLMQSQSARY
QHGTGLGLSISKHLIELMDGTLSVSSQPLLGTTFRLTLPLANEGQLRDQTETEHFKIVSNEMLNLTQEPIALPENPDGKL
ILIADDEPVNLRILESFLRLEGYRVACASDGQQALNMVEQQKPAMLLLDIMMPEVTGYEVCQRLRQNYSRYELPIVMLTA
LNQTEDKIKGFEVGANDYLVKPFNKHELSARIKVHIDASLSLKRKQQNLVLSEELSQLEQTEAILLDTQSKLLEQLENTP
EAIICINQKHKISYANHTATQLFKRSIEQLRRSSIEEFIAPKYLTFDQPHRSMDIDIFIQEQKHIVPSDIFTLPLETGMR
GMFIFNNDPHNVKQHISNLEIALDAMSQYAFAGDHSQLETIRELGGDFSQLVTKVEGEKSGKQQALRQLIVECMNQAIEY
WETHDGQTKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRPETLPKTPRWRTVLSSMDYILVHTDKDDALRAQLISLRDQLQ
HLVIQN

Nucleotide

• Length: 3381 bp

>NTDB_id=88957 OCU28_RS09105 WP_261815893.1 1963168..1966548(+) (chiS) [Vibrio gallicus strain CIP 107863]
ATGGCTCAAAACTCAACAACTCCCAAATTCAAAAGTATCAAAAGCAACCTAATGGCAATATTCTTGATTGTCAGCTTAAC
CCCTATGCTGATAGTCGGATATTTCTTTCTACGTGCCCATAGCTTAGATCTCACCGAACAAAGCACGCAATATCTCATTG
CTGCTAGAAATGGTGCCAGTCAAAAGGTTTCAACCTACTTCAATAACCTCGATGCTGAGGTGGTGGGCTTTGTACACTCC
GAGTTAGCCTATTCCAGTGGTGGGCGCTTCTATGGCCTGATTGATGGCTTTCGCCGCTTAGGCAAAACCATTGAACAGTC
TAGAGAAATTGGTCAGAAACGTTATGTTCCAGGTACTAGCGCAGTATTGAGCCAACCAACAGTGCGCAACTCAGCTAACT
TTGTGGGTGTTGAGCGATATCGACTGATCCATGACCGATACCACAGCACCTATCTAGATCTTTTACAACGCTCAGATTTT
GACGATATTTTATTGGTCGACCTAGATGGTAACGTCGCCTATTCAACGCTAAAAAACGACTATTTTGCGACAAATCTAGA
CTCAGGTCGTTATCAAAGCAGTCAACTAGGTAAGCTATTCGATAGCCTCAAGGCAAGCATGTCGAATAAACAGAAAGACT
TGCTCAAATACAACGACTTAGTACTAATGAGCGACTTTAGCCGAGCAACAGGTACCGATATAAAACAAAGGGTTGTGTGG
TTTGCTTCACCTATTATCCAGCAAGGCCATCTGCACAGCTACGCCTTTATGCGCCTACCTATCGAGCGTTTAAAAAGTAT
TATCACCGACGATTCAGCAAATAATGTCAGTATTTTATTGCTCGACCAATATCAAAATCTGCTCTCTGGAAATCCAGAAC
ATGTAGAAGAGATCTCAGCCCTACAACAGCACAAATCTTCTGTAGATATCACTCAATACACCGACGACAATAATGCCATC
ATGATGGCCTCTTTTTCCCCATTAGAGATCCACGGCATGCTGTGGTCTATTTTTTCACAATCTCCTGAAGAGCTAGCTTT
TGCTCGGGTTTCTAACCTACAGAAACTATTTATCGGCATCATTATTGTGGCCTTGATACTGGTTTTTATTACCTCGCACT
ACCTCGCCAATCTCATTACTCGACCTTTACTCAAGCTCACTTGGGCCGCCGAGCGTATCTCAGCAGGTGACCTGGCAGAA
GAAGTAGAAGGGGCTCAAAGAAAGGATGAGATTGGTCGATTGGCGGTAAGCTTTGCGCGTATGCAGCGCTCAGTACGAGA
GAAAATTGCGCTTATCGAACATCAAAACCAAGAGCTTGAGTATAATCTGCAGACCATAGCCAAGCAGAACCAAGACCTGC
AAAGTGCAGATAAACTTAAAGATGAGTTTCTCGCCACCACCTCTCATGAACTGCGTACTCCACTGCATGGCATGATAGGT
GTAGCACAAACCTTATTGTCTGGAGCGCATGGCAATGTCCCAAGTGCACAGTGTTTTCAGCTGGAAATTATTATAAACAG
TGGCAACCGCCTATCGAACCTAGTTGATGACTTGTTGGACTACCATAAGATGCGCTATGGCGACCTAAAATTGGAGCACC
ATGCGGTGTCGGTAGCAAGCTCTGCGCAATTGGTGGTTGAGCTTTCTAATCACTTAATCGTCAATAAACCGGTGAGACTC
CTGAACCATATTGACCCGCGCCTACCTATGGTCAGCGCGGATCCACAAAGATTGGAACAGGTTTTATACAACCTTATTGG
CAACGCAATAAAGTTTACTAATGAAGGTAAGGTGGTACTCAATGCTACCCAGGAAGCGGAACAACTGGTTATTGAGGTCA
TTGATACTGGCCGAGGTATTCCGGAACAGGATCTAGCAACAATTTTCGAGCCATTAATGCAAAGTCAGTCTGCTCGCTAT
CAACACGGCACTGGGTTAGGTTTGTCGATAAGTAAGCACTTGATTGAATTAATGGATGGCACGCTATCGGTCAGCAGTCA
GCCACTATTAGGGACAACGTTTAGGCTCACCTTGCCCTTAGCTAATGAAGGTCAACTACGTGACCAAACAGAGACCGAGC
ACTTTAAGATTGTCAGTAATGAGATGCTTAACCTTACCCAAGAGCCTATAGCTTTGCCAGAAAACCCCGACGGCAAGCTG
ATACTGATTGCCGATGATGAACCGGTTAATTTACGCATACTGGAAAGCTTCCTACGTTTAGAAGGATACCGTGTCGCGTG
TGCTAGTGATGGGCAGCAAGCCCTAAATATGGTTGAACAACAAAAGCCAGCGATGTTGTTGCTCGATATTATGATGCCTG
AGGTTACCGGCTATGAAGTATGCCAAAGGTTGCGTCAAAACTACTCGCGCTATGAACTGCCGATCGTGATGCTCACCGCG
CTTAATCAAACGGAAGATAAGATAAAGGGCTTTGAAGTTGGGGCTAATGATTACCTTGTAAAGCCGTTCAACAAACATGA
GTTGTCCGCTCGAATTAAGGTTCATATTGATGCTAGCCTCTCCCTGAAACGTAAGCAGCAAAACCTAGTACTAAGCGAAG
AGCTATCTCAACTTGAGCAGACCGAAGCCATATTATTAGATACTCAATCCAAGCTACTTGAGCAACTAGAAAACACCCCA
GAAGCGATAATATGCATCAACCAAAAGCATAAAATCAGCTACGCTAACCACACTGCTACACAGCTATTCAAGCGTTCAAT
TGAGCAACTACGACGTTCAAGTATCGAAGAGTTTATCGCGCCTAAATACCTCACATTCGATCAGCCACACCGTAGCATGG
ATATAGATATTTTCATTCAAGAACAGAAGCACATCGTACCCAGCGACATTTTCACTCTCCCGTTAGAGACCGGAATGCGC
GGCATGTTTATCTTCAACAATGACCCGCATAATGTGAAGCAGCATATTTCTAATCTAGAAATTGCACTAGATGCTATGTC
TCAATATGCCTTTGCCGGAGACCACTCCCAATTAGAGACCATTCGTGAATTAGGCGGCGATTTTTCTCAATTAGTCACTA
AGGTTGAAGGTGAAAAAAGTGGCAAGCAGCAAGCACTGCGCCAGCTAATAGTAGAGTGTATGAATCAGGCAATTGAATAC
TGGGAGACCCATGATGGGCAAACTAAATTCACCTTTGCTGAGCAAAGTGGCTTATGGCGAGTCTACCTCGATAGAAGTAC
ACTGCAAACGCGCACTTTAGATAAGTACCTAAGACCTGAGACTCTGCCTAAAACCCCCCGTTGGCGAACTGTGCTTAGCT
CTATGGACTATATCCTTGTGCATACAGACAAAGATGACGCACTAAGAGCTCAACTCATCTCATTAAGAGACCAATTACAG
CACCTCGTAATCCAAAACTAG

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-426)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-681)

• PAS fold (PAS) (874-922)

• Response regulator receiver domain (Response_reg) (721-832)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	51.764	100	0.521