Detailed information NTG0889420

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RW078_RS10155
• Genome accession: NZ_CP136178
• Coordinates: 2145248..2145949 (-)
• Length: 233 a.a.
• NCBI ID: WP_086263569.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ABO21-A045
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2140248..2150949

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RW078_RS10125 (RW078_10125)	-	2140555..2140998 (-)	444	WP_001246675.1	SRPBCC family protein	-
RW078_RS10130 (RW078_10130)	tadA	2141068..2141571 (-)	504	WP_031954106.1	tRNA adenosine(34) deaminase TadA	-
RW078_RS10135 (RW078_10135)	-	2141578..2142702 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
RW078_RS10140 (RW078_10140)	ung	2142699..2143412 (-)	714	WP_001177530.1	uracil-DNA glycosylase	-
RW078_RS10145 (RW078_10145)	-	2143463..2144059 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
RW078_RS10150 (RW078_10150)	gspK	2144289..2145248 (-)	960	WP_317858585.1	type II secretion system minor pseudopilin GspK	-
RW078_RS10155 (RW078_10155)	xcpW	2145248..2145949 (-)	702	WP_086263569.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RW078_RS10160 (RW078_10160)	xcpV	2145949..2146329 (-)	381	WP_038348264.1	type II secretion system minor pseudopilin GspI	Machinery gene
RW078_RS10165 (RW078_10165)	-	2146319..2146873 (-)	555	WP_000841373.1	type II secretion system protein	-
RW078_RS10170 (RW078_10170)	-	2146883..2147491 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RW078_RS10175 (RW078_10175)	-	2147529..2148302 (-)	774	WP_000497295.1	TatD family hydrolase	-
RW078_RS10180 (RW078_10180)	-	2148320..2148661 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
RW078_RS10185 (RW078_10185)	-	2148673..2149653 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
RW078_RS10190 (RW078_10190)	kdsB	2149665..2150426 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26645.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=889420 RW078_RS10155 WP_086263569.1 2145248..2145949(-) (xcpW) [Acinetobacter baumannii strain ABO21-A045]
MIKNKYIHIRSFSSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=889420 RW078_RS10155 WP_086263569.1 2145248..2145949(-) (xcpW) [Acinetobacter baumannii strain ABO21-A045]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTACGTTTTAGTAAAGCAGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991