Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   RWV42_RS02270 Genome accession   NZ_CP136173
Coordinates   467264..468148 (+) Length   294 a.a.
NCBI ID   WP_114189589.1    Uniprot ID   A0A335G041
Organism   Acinetobacter baumannii strain ABO21-A049     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 462264..473148
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RWV42_RS02245 (RWV42_02245) - 462662..463909 (-) 1248 WP_000893466.1 YihY family inner membrane protein -
  RWV42_RS02250 (RWV42_02250) wrbA 464197..464790 (+) 594 WP_001183348.1 NAD(P)H:quinone oxidoreductase -
  RWV42_RS02255 (RWV42_02255) - 464843..465418 (-) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  RWV42_RS02260 (RWV42_02260) - 465491..466204 (-) 714 WP_000201548.1 DUF3108 domain-containing protein -
  RWV42_RS02265 (RWV42_02265) - 466362..467033 (-) 672 WP_001193961.1 hypothetical protein -
  RWV42_RS02270 (RWV42_02270) tonB2 467264..468148 (+) 885 WP_114189589.1 energy transducer TonB Machinery gene
  RWV42_RS02275 (RWV42_02275) ybeY 468238..468714 (-) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  RWV42_RS02280 (RWV42_02280) - 468724..469812 (-) 1089 WP_000122983.1 PhoH family protein -
  RWV42_RS02285 (RWV42_02285) miaB 469850..471301 (-) 1452 WP_000218141.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33681.51 Da        Isoelectric Point: 9.0935

>NTDB_id=889372 RWV42_RS02270 WP_114189589.1 467264..468148(+) (tonB2) [Acinetobacter baumannii strain ABO21-A049]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPTEDAIKHADFLAQADQQGSGA
FREAHRMSNNSPTPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRTIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=889372 RWV42_RS02270 WP_114189589.1 467264..468148(+) (tonB2) [Acinetobacter baumannii strain ABO21-A049]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTGCTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCATCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGCGATCAAGCATGCAGACTTTTTAGCTCAAGCCGATCAACAAGGTTCAGGAGCT
TTTCGGGAAGCTCATCGGATGTCGAATAACTCTCCAACGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAGATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCGGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTACAATTCGTTTG
CTTGAAAGCTCAGGCCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCGGAGCTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A335G041

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

98.639

100

0.986