Detailed information NTG0889331

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RWU60_RS10375
• Genome accession: NZ_CP136172
• Coordinates: 2222605..2223306 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594585.1
• Uniprot ID: A0A009Q1Y5
• Organism: Acinetobacter baumannii strain ABO21-A051
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2217605..2228306

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RWU60_RS10345 (RWU60_10345)	-	2217912..2218355 (-)	444	WP_001246675.1	SRPBCC family protein	-
RWU60_RS10350 (RWU60_10350)	tadA	2218425..2218928 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
RWU60_RS10355 (RWU60_10355)	-	2218935..2220059 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
RWU60_RS10360 (RWU60_10360)	ung	2220056..2220769 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
RWU60_RS10365 (RWU60_10365)	-	2220820..2221416 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
RWU60_RS10370 (RWU60_10370)	gspK	2221646..2222605 (-)	960	WP_000301463.1	type II secretion system minor pseudopilin GspK	-
RWU60_RS10375 (RWU60_10375)	xcpW	2222605..2223306 (-)	702	WP_000594585.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RWU60_RS10380 (RWU60_10380)	xcpV	2223306..2223686 (-)	381	WP_317856675.1	type II secretion system minor pseudopilin GspI	Machinery gene
RWU60_RS10385 (RWU60_10385)	-	2223676..2224230 (-)	555	WP_317856676.1	type II secretion system protein	-
RWU60_RS10390 (RWU60_10390)	-	2224240..2224848 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RWU60_RS10395 (RWU60_10395)	-	2224886..2225659 (-)	774	WP_000497298.1	TatD family hydrolase	-
RWU60_RS10400 (RWU60_10400)	-	2225677..2226018 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
RWU60_RS10405 (RWU60_10405)	-	2226030..2227010 (-)	981	WP_317856677.1	DNA polymerase III subunit delta'	-
RWU60_RS10410 (RWU60_10410)	kdsB	2227022..2227783 (-)	762	WP_000680698.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26595.57 Da
• Isoelectric Point: 9.5501

>NTDB_id=889331 RWU60_RS10375 WP_000594585.1 2222605..2223306(-) (xcpW) [Acinetobacter baumannii strain ABO21-A051]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=889331 RWU60_RS10375 WP_000594585.1 2222605..2223306(-) (xcpW) [Acinetobacter baumannii strain ABO21-A051]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009Q1Y5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	100	100	1