Detailed information NTG0889285

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RWT38_RS09970
• Genome accession: NZ_CP136171
• Coordinates: 2124097..2124798 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain ABO21-A057
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2119097..2129798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RWT38_RS09940 (RWT38_09940)	-	2119403..2119846 (-)	444	WP_001246675.1	SRPBCC family protein	-
RWT38_RS09945 (RWT38_09945)	tadA	2119916..2120419 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
RWT38_RS09950 (RWT38_09950)	-	2120426..2121550 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
RWT38_RS09955 (RWT38_09955)	ung	2121547..2122260 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
RWT38_RS09960 (RWT38_09960)	-	2122311..2122907 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
RWT38_RS09965 (RWT38_09965)	gspK	2123138..2124097 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
RWT38_RS09970 (RWT38_09970)	xcpW	2124097..2124798 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RWT38_RS09975 (RWT38_09975)	xcpV	2124798..2125178 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
RWT38_RS09980 (RWT38_09980)	-	2125168..2125722 (-)	555	WP_000841373.1	type II secretion system protein	-
RWT38_RS09985 (RWT38_09985)	-	2125732..2126340 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
RWT38_RS09990 (RWT38_09990)	-	2126378..2127151 (-)	774	WP_000497298.1	TatD family hydrolase	-
RWT38_RS09995 (RWT38_09995)	-	2127169..2127510 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
RWT38_RS10000 (RWT38_10000)	-	2127522..2128502 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
RWT38_RS10005 (RWT38_10005)	kdsB	2128514..2129275 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=889285 RWT38_RS09970 WP_000594589.1 2124097..2124798(-) (xcpW) [Acinetobacter baumannii strain ABO21-A057]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=889285 RWT38_RS09970 WP_000594589.1 2124097..2124798(-) (xcpW) [Acinetobacter baumannii strain ABO21-A057]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996