Detailed information NTG0889129

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AAEY32_RS21870
• Genome accession: NZ_CP151643
• Coordinates: 4503452..4504477 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Ec73552
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4498452..4509477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAEY32_RS21850 (AAEY32_21805)	metJ	4499513..4499830 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AAEY32_RS21855 (AAEY32_21810)	yiiX	4500014..4500622 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AAEY32_RS21860 (AAEY32_21815)	rpmE	4500683..4500895 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AAEY32_RS21865 (AAEY32_21820)	priA	4501098..4503296 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AAEY32_RS21870 (AAEY32_21825)	cytR	4503452..4504477 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AAEY32_RS21875 (AAEY32_21830)	ftsN	4504569..4505528 (+)	960	WP_000068828.1	cell division protein FtsN	-
AAEY32_RS21880 (AAEY32_21835)	hslV	4505621..4506151 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AAEY32_RS21885 (AAEY32_21840)	hslU	4506161..4507492 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AAEY32_RS21890 (AAEY32_21845)	menA	4507559..4508485 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AAEY32_RS21895 (AAEY32_21850)	rraA	4508578..4509063 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AAEY32_RS21900 (AAEY32_21855)	zapB	4509148..4509393 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=889129 AAEY32_RS21870 WP_000644904.1 4503452..4504477(+) (cytR) [Escherichia coli strain Ec73552]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=889129 AAEY32_RS21870 WP_000644904.1 4503452..4504477(+) (cytR) [Escherichia coli strain Ec73552]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628