Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   AAEY32_RS14270 Genome accession   NZ_CP151643
Coordinates   2896013..2896642 (-) Length   209 a.a.
NCBI ID   WP_000839153.1    Uniprot ID   Q32HU7
Organism   Escherichia coli strain Ec73552     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2891013..2901642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAEY32_RS14255 (AAEY32_14255) helD 2891255..2893309 (-) 2055 WP_001295354.1 DNA helicase IV -
  AAEY32_RS14260 (AAEY32_14260) yccF 2893432..2893878 (+) 447 WP_001261235.1 YccF domain-containing protein -
  AAEY32_RS14265 (AAEY32_14265) yccS 2893888..2896050 (+) 2163 WP_000875058.1 YccS family putative transporter -
  AAEY32_RS14270 (AAEY32_14270) sxy/tfoX 2896013..2896642 (-) 630 WP_000839153.1 CRP-S regulon transcriptional coactivator Sxy Regulator
  AAEY32_RS14275 (AAEY32_14275) sulA 2896861..2897370 (+) 510 WP_000288710.1 SOS-induced cell division inhibitor SulA -
  AAEY32_RS14280 (AAEY32_14280) ompA 2897727..2898767 (+) 1041 WP_001400178.1 porin OmpA -
  AAEY32_RS14285 (AAEY32_14285) matP 2898843..2899295 (-) 453 WP_000877161.1 macrodomain Ter protein MatP -
  AAEY32_RS14290 (AAEY32_14290) ycbZ 2899481..2901241 (+) 1761 WP_000152888.1 Lon protease family protein -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 24147.02 Da        Isoelectric Point: 9.2180

>NTDB_id=889105 AAEY32_RS14270 WP_000839153.1 2896013..2896642(-) (sxy/tfoX) [Escherichia coli strain Ec73552]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE

Nucleotide


Download         Length: 630 bp        

>NTDB_id=889105 AAEY32_RS14270 WP_000839153.1 2896013..2896642(-) (sxy/tfoX) [Escherichia coli strain Ec73552]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA

Domains

Predicted by InterProScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q32HU7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

100

100

1