Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   F6I35_RS02865 Genome accession   NZ_CP136160
Coordinates   518775..519485 (-) Length   236 a.a.
NCBI ID   WP_022525174.1    Uniprot ID   -
Organism   Streptococcus anginosus strain UMB8616     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 513775..524485
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I35_RS02850 (F6I35_0002850) - 514164..515288 (+) 1125 WP_024052060.1 AI-2E family transporter -
  F6I35_RS02855 (F6I35_0002855) - 515512..517159 (+) 1648 Protein_523 phosphoenolpyruvate carboxykinase (ATP) -
  F6I35_RS02860 (F6I35_0002860) - 517276..518616 (+) 1341 WP_024052057.1 hemolysin family protein -
  F6I35_RS02865 (F6I35_0002865) treR 518775..519485 (-) 711 WP_022525174.1 trehalose operon repressor Regulator
  F6I35_RS02870 (F6I35_0002870) treP 519665..521677 (+) 2013 WP_070815192.1 PTS system trehalose-specific EIIBC component -
  F6I35_RS02875 (F6I35_0002875) treC 521884..523515 (+) 1632 WP_070815191.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27642.67 Da        Isoelectric Point: 9.2637

>NTDB_id=888953 F6I35_RS02865 WP_022525174.1 518775..519485(-) (treR) [Streptococcus anginosus strain UMB8616]
MKKYEQIFKLLEQDILNEKYQMNDYLPSEHELVQTYKVSRDTIRKSLDLLQKAGLIQKMRGQGSKVIQQEQIDFPVSNLT
SYQELVRQHGMNSKTNVIQLEKITVDKKLSSLTGFPEYRLVWRIIRQRVVDGIASVLDIDYLDKSFVPSISREIAEHSIY
AYLEDELGLHISYAQKEITIDPATNRDKILMNIGNDHHVVSVKSKVYLADGQQFQFTDSRHKLEKFRFVDFSKRQK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=888953 F6I35_RS02865 WP_022525174.1 518775..519485(-) (treR) [Streptococcus anginosus strain UMB8616]
ATGAAAAAATATGAACAAATTTTTAAACTCTTAGAACAAGATATTCTAAACGAGAAATATCAGATGAATGATTATCTTCC
TAGCGAACACGAACTTGTCCAGACCTACAAGGTCAGCCGTGACACGATTCGTAAATCGCTTGATTTGCTTCAAAAAGCTG
GTCTCATTCAAAAAATGAGAGGTCAAGGCTCTAAAGTCATCCAACAAGAACAGATTGACTTTCCTGTTTCCAACCTAACT
AGTTACCAAGAACTTGTTCGGCAACATGGAATGAATTCTAAAACCAATGTCATACAGTTAGAAAAAATTACAGTTGATAA
AAAATTATCCAGTCTTACTGGTTTTCCTGAATACCGTCTGGTGTGGCGGATTATTCGCCAAAGGGTCGTTGACGGGATTG
CCTCCGTCTTGGATATTGATTACCTTGATAAGAGTTTTGTCCCTTCTATTAGCCGTGAAATTGCAGAGCATTCAATTTAT
GCTTATTTAGAAGATGAACTGGGACTACACATTTCTTACGCCCAAAAAGAAATCACAATTGATCCAGCCACCAATCGCGA
TAAAATATTGATGAACATTGGAAATGACCACCATGTCGTCTCTGTCAAATCCAAAGTTTATCTTGCAGACGGACAACAAT
TTCAGTTTACAGATAGTCGTCATAAACTCGAAAAATTCCGTTTCGTTGACTTTTCCAAACGGCAAAAATGA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(89-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

64.831

100

0.648