Detailed information NTG0088894

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCU35_RS02765
• Genome accession: NZ_AP024864
• Coordinates: 574355..577753 (-)
• Length: 1132 a.a.
• NCBI ID: WP_261825611.1
• Uniprot ID: -
• Organism: Vibrio breoganii strain CAIM 1829
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 569355..582753

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU35_RS02750	-	569920..570948 (-)	1029	WP_017028377.1	ABC transporter permease	-
OCU35_RS02755	-	570950..571936 (-)	987	WP_017028376.1	ABC transporter permease	-
OCU35_RS02760	-	572084..573757 (-)	1674	WP_017242574.1	ABC transporter substrate-binding protein	-
OCU35_RS02765	chiS	574355..577753 (-)	3399	WP_261825611.1	response regulator	Regulator
OCU35_RS02770	rsmC	577856..578875 (-)	1020	WP_065210184.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCU35_RS02775	-	578889..579974 (-)	1086	WP_102322178.1	AI-2E family transporter	-
OCU35_RS02780	hemL	580090..581376 (-)	1287	WP_261825612.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCU35_RS02785	erpA	581575..581916 (+)	342	WP_017028370.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1132 a.a.
• Molecular weight: 128057.63 Da
• Isoelectric Point: 4.8040

>NTDB_id=88894 OCU35_RS02765 WP_261825611.1 574355..577753(-) (chiS) [Vibrio breoganii strain CAIM 1829]
MSKNHTRPKFKRLQSTLMGAFMLVSLIPMLLVAFFFLRSHTQDLQEQSTTYLTSMRDGNANKVTAYIGNLDSEVIGFVHS
ELAYASGGRFYGLIDSFRRLGKDLDESRSIGQQRYIPGSGNAIRTKTVRGNENYTSVERYRLLHKRYHSTFQSLLERSDF
DDIALVDLEGNVAYSVQKYDYYATNLNSERYKKTELGGLFKQLKDYVASNKDSLEQYNDIVLMSDFSIDGNSDSTEEVAW
FAAPIVQRGYLHSYAFFRLPLSALTDLISEEHLVNLNVSLFDKSLKLLADSSEGVDSKQSSPVAIKALEGSAEVETYANL
SGDNTIAAYAPIDVHGLTWAVVVETPEEIAFERVNQLFKLFFIIVLSAAVIVVITSHYLSNFITHPLLKLTWAAERISAG
DLKENVEGTERKDEIGRLAVSFERMQRSIREKIELIKEQNKELEFNLDTIATQNGELQLADKLKDEFLATTSHELRTPLH
GMIGVAQAMLSEAHGSVPPSQRYQLEIIINSGHRLSNLVDDLLDYHKMQYGHLQLEPTAVSLSSASQLVVELSKHLVDKK
PVRIINQIDSSLPMVSADPQRLEQVLYNLVGNAIKFTSEGKVILNAEQQGEQLRIQVIDTGHGIPKEDLDNIFEPLTQSN
SSGYHQGTGLGLSISKRLIEIMRGELTVTSQPMLGTTFTMTLPLASKQELETFSSESDTEHYSREEFHQTEFDEESVSLP
NNPDGKLVMIADDEPVNLKILESFLRVEGYRVVSAHNGREVLDLIGEEKPDILLLDIMMPELSGFQVCEYLRNQYNYNEL
PIIMLTALNQTEDKVKGFDCGANDYLVKPFNKQELSARIQVHINASLSERRKQENDSLSAELTQRERVESLLLETQTKLL
EQLESTPEAIVCINENHKITFANKSATELLKRSIEQIKRSQIEEFIAPKYLQFDQPHRSMDIDVFVGETKQVIASDIFTL
PLETGLRGMIIFNSDPDDANQRINNLEVALDALASYAFAGDKSQLEELKELGDEFADLVGQLDNSKDSKQQNMRQLLVDC
MSSALEYWESHDGNTKFNFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLNSLDFILAHSNHDDAQRAQLL
ELREQLQNLVAQ

Nucleotide

• Length: 3399 bp

>NTDB_id=88894 OCU35_RS02765 WP_261825611.1 574355..577753(-) (chiS) [Vibrio breoganii strain CAIM 1829]
ATGTCAAAAAATCACACTCGCCCAAAATTTAAACGTCTGCAAAGCACCCTTATGGGCGCCTTTATGTTGGTCAGCCTTAT
TCCTATGCTGCTGGTTGCTTTCTTCTTTCTTCGTTCCCACACTCAAGACCTCCAAGAGCAAAGCACCACGTATCTAACCT
CGATGAGGGATGGCAATGCTAATAAGGTTACCGCTTATATCGGCAATCTCGACTCAGAGGTGATTGGTTTTGTGCATTCG
GAACTGGCTTACGCCAGTGGTGGACGATTTTATGGGTTGATTGACTCTTTCAGGCGCTTAGGTAAAGACTTAGACGAGTC
TAGAAGCATTGGCCAACAGAGATACATTCCAGGCTCTGGAAATGCCATTCGTACGAAAACCGTCAGAGGCAATGAAAACT
ACACCAGTGTTGAGCGCTACCGATTACTGCACAAGCGCTATCATTCTACCTTCCAAAGTTTGTTAGAGCGCTCGGACTTC
GACGATATCGCCTTGGTTGATCTTGAAGGCAACGTCGCCTATTCCGTGCAAAAATACGATTACTACGCAACGAACCTGAA
TTCAGAGCGCTACAAGAAAACTGAACTGGGTGGGCTATTCAAACAACTCAAAGACTACGTCGCCTCAAACAAAGACTCCT
TAGAACAATACAATGACATCGTTCTGATGAGCGACTTTTCTATTGACGGTAACTCTGACAGCACAGAGGAAGTGGCTTGG
TTTGCCGCCCCGATTGTGCAAAGAGGCTACTTACACAGCTACGCATTTTTCCGACTTCCACTGTCTGCGCTCACAGACCT
TATCTCAGAGGAGCATCTGGTTAACCTGAATGTATCCTTGTTTGATAAGTCTTTAAAACTACTCGCAGACAGTAGCGAGG
GCGTTGATTCAAAGCAAAGCTCCCCGGTCGCCATAAAGGCCCTTGAGGGTTCTGCCGAGGTTGAAACGTACGCCAACTTA
TCTGGCGACAATACCATCGCAGCCTACGCGCCTATCGATGTGCATGGCCTAACATGGGCAGTGGTGGTTGAGACCCCAGA
AGAAATCGCATTTGAGCGAGTAAATCAGCTATTTAAGCTGTTTTTTATCATTGTATTAAGCGCTGCTGTTATCGTAGTGA
TCACCTCTCACTACCTATCGAACTTCATAACCCACCCTCTGCTTAAGCTTACCTGGGCCGCAGAGCGAATCTCGGCTGGC
GACCTTAAAGAAAATGTAGAGGGCACTGAGCGCAAGGATGAGATAGGACGACTTGCAGTCAGCTTTGAGAGGATGCAACG
TTCAATTCGAGAAAAGATTGAGTTGATCAAAGAGCAGAACAAAGAACTCGAGTTCAACCTAGATACCATCGCTACACAAA
ATGGTGAATTGCAGCTAGCGGATAAACTAAAAGATGAGTTCTTGGCCACCACCTCTCATGAGCTAAGAACCCCGCTACAC
GGTATGATTGGCGTCGCCCAAGCTATGCTCAGTGAAGCCCATGGAAGCGTGCCACCATCTCAAAGATATCAACTAGAGAT
CATCATCAATAGTGGACACAGATTGTCCAACCTAGTGGATGACCTTTTGGATTATCATAAGATGCAATATGGCCATTTGC
AGCTTGAACCTACTGCGGTTTCACTGTCGTCGGCCTCTCAATTGGTTGTGGAATTATCAAAACACTTGGTCGATAAAAAG
CCCGTTCGCATCATCAATCAAATAGACAGCAGCTTGCCTATGGTCAGCGCCGATCCACAAAGACTTGAGCAAGTGCTGTA
CAACCTTGTAGGCAACGCAATCAAGTTCACCTCAGAAGGTAAGGTGATCTTAAATGCAGAGCAGCAAGGCGAACAGCTCA
GAATACAGGTCATAGATACCGGACATGGCATCCCTAAAGAAGACCTAGACAATATCTTCGAGCCACTGACTCAAAGCAAT
TCTTCTGGCTACCATCAAGGTACTGGCCTTGGGTTATCTATCAGTAAGCGCTTGATTGAAATCATGCGCGGTGAACTGAC
TGTGACTAGCCAACCTATGCTCGGCACTACCTTTACCATGACCCTGCCACTTGCAAGCAAACAAGAGCTTGAAACCTTTA
GTAGTGAGTCAGACACTGAGCACTACTCTCGTGAGGAGTTTCATCAAACCGAGTTTGATGAAGAGTCTGTTTCTTTGCCC
AATAATCCAGATGGCAAGCTCGTCATGATTGCGGATGACGAACCCGTTAACCTCAAGATACTGGAGAGCTTCTTGCGAGT
AGAAGGGTATAGGGTGGTGAGCGCACATAATGGCCGAGAGGTGCTCGACCTCATTGGCGAAGAAAAGCCCGATATTCTGC
TGCTGGATATCATGATGCCAGAATTGAGCGGATTCCAAGTTTGTGAGTACTTACGTAATCAGTACAACTACAACGAGCTG
CCAATCATCATGCTCACCGCCTTGAATCAAACAGAGGACAAAGTGAAGGGCTTTGACTGTGGCGCTAATGATTACCTAGT
TAAGCCCTTTAATAAGCAAGAGCTATCAGCACGAATTCAGGTGCACATAAATGCCAGTCTCTCGGAAAGGCGCAAGCAGG
AAAACGACTCATTGAGCGCTGAGCTAACCCAACGTGAAAGGGTTGAGTCTTTACTTTTGGAAACGCAAACCAAGCTTCTT
GAACAGCTAGAGAGCACTCCAGAGGCGATTGTTTGTATCAATGAGAACCACAAGATCACCTTTGCCAATAAGTCTGCGAC
TGAGCTTCTAAAGCGTTCTATTGAGCAAATTAAGCGCTCACAAATTGAAGAGTTTATCGCGCCTAAGTACCTACAGTTTG
ATCAGCCTCACCGAAGCATGGATATCGATGTCTTCGTAGGTGAAACCAAGCAGGTCATTGCCAGCGATATCTTTACCTTG
CCGTTGGAAACGGGCCTGCGAGGCATGATTATCTTCAATTCAGACCCAGATGATGCTAACCAACGCATCAACAACCTTGA
AGTGGCGTTAGATGCCTTAGCCAGTTACGCGTTTGCTGGAGATAAATCCCAACTGGAAGAGCTCAAAGAGCTTGGCGATG
AGTTTGCAGACTTGGTTGGACAGTTGGATAACAGCAAGGACAGCAAACAGCAGAATATGCGACAGCTTCTTGTAGACTGT
ATGTCATCCGCACTTGAATACTGGGAAAGCCATGACGGTAACACTAAATTCAATTTTGCTGAGCAAAGTGGCCTGTGGCG
TGTTTATCTTGATAGAAGCACCCTGCAGACAAGAACGCTAGACAAATACCTAAGGGTAGAAACCCTGCCTAAAACGCCTC
GCTGGCGTACCGTTCTCAATTCCTTAGACTTTATTCTTGCGCACTCTAATCACGATGATGCGCAGCGCGCACAGCTGCTT
GAATTAAGGGAGCAGTTACAGAACTTAGTCGCACAATAA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (881-929)

• Response regulator receiver domain (Response_reg) (728-840)

• His Kinase A (phospho-acceptor) domain (HisKA) (464-530)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (578-685)

• HAMP domain (HAMP) (379-431)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	56.487	100	0.565