Detailed information NTG0888446

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: RUI02_RS19180
• Genome accession: NZ_CP136099
• Coordinates: 3699181..3700326 (+)
• Length: 381 a.a.
• NCBI ID: WP_046381403.1
• Uniprot ID: A0AA96ZUF3
• Organism: Bacillus sp. TSA-4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3694181..3705326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RUI02_RS19155 (RUI02_19155)	-	3694196..3695476 (+)	1281	WP_046381400.1	pitrilysin family protein	-
RUI02_RS19160 (RUI02_19160)	albG	3695473..3696174 (+)	702	WP_029726080.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
RUI02_RS19165 (RUI02_19165)	-	3696180..3697556 (-)	1377	WP_046381401.1	YncE family protein	-
RUI02_RS19170 (RUI02_19170)	-	3697596..3698951 (-)	1356	WP_046381402.1	YncE family protein	-
RUI02_RS19175 (RUI02_19175)	-	3698948..3699178 (-)	231	WP_024572000.1	hypothetical protein	-
RUI02_RS19180 (RUI02_19180)	rapF	3699181..3700326 (+)	1146	WP_046381403.1	response regulator aspartate phosphatase RapF	Regulator
RUI02_RS19185 (RUI02_19185)	phrF	3700310..3700429 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
RUI02_RS19190 (RUI02_19190)	-	3700527..3700989 (+)	463	Protein_3727	YbaK/EbsC family protein	-
RUI02_RS19195 (RUI02_19195)	speB	3701021..3701893 (-)	873	WP_003227545.1	agmatinase	-
RUI02_RS19200 (RUI02_19200)	speE	3701954..3702784 (-)	831	WP_003227543.1	spermidine synthase	-
RUI02_RS19205 (RUI02_19205)	-	3702987..3705062 (+)	2076	WP_029726084.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45622.10 Da
• Isoelectric Point: 5.0624

>NTDB_id=888446 RUI02_RS19180 WP_046381403.1 3699181..3700326(+) (rapF) [Bacillus sp. TSA-4]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEQEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=888446 RUI02_RS19180 WP_046381403.1 3699181..3700326(+) (rapF) [Bacillus sp. TSA-4]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAAGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACAGGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575