Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   RUI02_RS07660 Genome accession   NZ_CP136099
Coordinates   1451404..1451868 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus sp. TSA-4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1446404..1456868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RUI02_RS07640 (RUI02_07640) kinA 1446871..1448691 (+) 1821 WP_046380991.1 sporulation histidine kinase KinA -
  RUI02_RS07645 (RUI02_07645) - 1448701..1449882 (-) 1182 WP_003232415.1 aminotransferase A -
  RUI02_RS07650 (RUI02_07650) - 1450084..1450245 (-) 162 WP_003245246.1 hypothetical protein -
  RUI02_RS07655 (RUI02_07655) cheV 1450449..1451360 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  RUI02_RS07660 (RUI02_07660) kre 1451404..1451868 (-) 465 WP_003232406.1 YkyB family protein Regulator
  RUI02_RS07665 (RUI02_07665) - 1451994..1453286 (-) 1293 WP_046380992.1 MFS transporter -
  RUI02_RS07670 (RUI02_07670) - 1453362..1453856 (-) 495 WP_072557193.1 L,D-transpeptidase family protein -
  RUI02_RS07675 (RUI02_07675) - 1453913..1454773 (-) 861 WP_017697271.1 metallophosphoesterase -
  RUI02_RS07680 (RUI02_07680) fadH 1454916..1455680 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=888402 RUI02_RS07660 WP_003232406.1 1451404..1451868(-) (kre) [Bacillus sp. TSA-4]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=888402 RUI02_RS07660 WP_003232406.1 1451404..1451868(-) (kre) [Bacillus sp. TSA-4]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1