Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   RS399_RS02270 Genome accession   NZ_CP135973
Coordinates   467828..468292 (+) Length   154 a.a.
NCBI ID   WP_019258265.1    Uniprot ID   A0A2M8T4C3
Organism   Bacillus inaquosorum strain SI3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 462828..473292
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RS399_RS02250 (RS399_02250) fadH 464016..464780 (-) 765 WP_003238930.1 2,4-dienoyl-CoA reductase -
  RS399_RS02255 (RS399_02255) - 464923..465783 (+) 861 WP_084992667.1 metallophosphoesterase -
  RS399_RS02260 (RS399_02260) - 465840..466334 (+) 495 WP_080010805.1 L,D-transpeptidase family protein -
  RS399_RS02265 (RS399_02265) - 466410..467702 (+) 1293 WP_084992668.1 MFS transporter -
  RS399_RS02270 (RS399_02270) kre 467828..468292 (+) 465 WP_019258265.1 YkyB family protein Regulator
  RS399_RS02275 (RS399_02275) cheV 468335..469246 (-) 912 WP_084992670.1 chemotaxis protein CheV -
  RS399_RS02280 (RS399_02280) - 469453..469614 (+) 162 WP_003238943.1 hypothetical protein -
  RS399_RS02285 (RS399_02285) - 469816..470997 (+) 1182 WP_084992672.1 aminotransferase A -
  RS399_RS02290 (RS399_02290) kinA 471007..472827 (-) 1821 WP_084992674.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17920.72 Da        Isoelectric Point: 10.3545

>NTDB_id=887988 RS399_RS02270 WP_019258265.1 467828..468292(+) (kre) [Bacillus inaquosorum strain SI3]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAHMSLTKAKHLLQEYVGMKEKPLVPNRQQPSYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=887988 RS399_RS02270 WP_019258265.1 467828..468292(+) (kre) [Bacillus inaquosorum strain SI3]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCATATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTTGTGC
CAAATCGCCAGCAGCCATCTTATCATAAACCTGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2M8T4C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

98.701

100

0.987