Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   RS399_RS02165 Genome accession   NZ_CP135973
Coordinates   451759..452343 (-) Length   194 a.a.
NCBI ID   WP_003238902.1    Uniprot ID   A0A9Q4HW25
Organism   Bacillus inaquosorum strain SI3     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 446759..457343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RS399_RS02140 (RS399_02140) mobB 447155..447676 (-) 522 WP_084992640.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  RS399_RS02145 (RS399_02145) glp 447637..448929 (-) 1293 WP_315957532.1 gephyrin-like molybdotransferase Glp -
  RS399_RS02150 (RS399_02150) - 448947..449966 (-) 1020 WP_084992644.1 molybdopterin-synthase adenylyltransferase MoeB -
  RS399_RS02155 (RS399_02155) - 450017..450616 (-) 600 WP_084992646.1 molybdenum cofactor guanylyltransferase -
  RS399_RS02160 (RS399_02160) - 450752..451717 (+) 966 WP_084992648.1 sporulation protein -
  RS399_RS02165 (RS399_02165) rok 451759..452343 (-) 585 WP_003238902.1 transcriptional regulator Rok Regulator
  RS399_RS02170 (RS399_02170) - 452795..453253 (-) 459 WP_084992650.1 redoxin domain-containing protein -
  RS399_RS02175 (RS399_02175) ahpA 453323..453865 (-) 543 WP_003238905.1 biofilm-specific peroxidase AhpA -
  RS399_RS02180 (RS399_02180) mscT 454109..454912 (+) 804 WP_084992652.1 small-conductance mechanosensitive channel protein MscT -
  RS399_RS02185 (RS399_02185) - 454949..455194 (-) 246 WP_003238909.1 YkuS family protein -
  RS399_RS02190 (RS399_02190) - 455255..456379 (-) 1125 WP_084992654.1 N-acetyldiaminopimelate deacetylase -
  RS399_RS02195 (RS399_02195) dapD 456449..457159 (-) 711 WP_084992656.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22145.10 Da        Isoelectric Point: 9.7169

>NTDB_id=887987 RS399_RS02165 WP_003238902.1 451759..452343(-) (rok) [Bacillus inaquosorum strain SI3]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEVKKDFRSERKTDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=887987 RS399_RS02165 WP_003238902.1 451759..452343(-) (rok) [Bacillus inaquosorum strain SI3]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTACGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATCGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAGTCAAAAAGGATTTCC
GTTCTGAACGAAAAACTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAACAGCAGTCTGTACAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCGAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAAGGTGAAATCGAATCAGCTGA
ATCTGCAGAATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

98.413

97.423

0.959