Detailed information NTG0088783

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OCU87_RS14485
• Genome accession: NZ_AP024850
• Coordinates: 3148598..3151984 (+)
• Length: 1128 a.a.
• NCBI ID: WP_062691234.1
• Uniprot ID: -
• Organism: Photobacterium sanguinicancri strain CECT 7579
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3143598..3156984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU87_RS14470	hemL	3144359..3145657 (+)	1299	WP_062691358.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OCU87_RS14475	-	3146047..3147132 (+)	1086	WP_083540989.1	AI-2E family transporter	-
OCU87_RS14480	rsmC	3147239..3148258 (+)	1020	WP_261857451.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OCU87_RS14485	chiS	3148598..3151984 (+)	3387	WP_062691234.1	response regulator	Regulator
OCU87_RS14490	-	3152902..3154581 (+)	1680	WP_261857452.1	ABC transporter substrate-binding protein	-
OCU87_RS14495	-	3154722..3155708 (+)	987	WP_062691232.1	ABC transporter permease	-
OCU87_RS14500	-	3155711..3156736 (+)	1026	WP_062691231.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126778.90 Da
• Isoelectric Point: 5.8990

>NTDB_id=88783 OCU87_RS14485 WP_062691234.1 3148598..3151984(+) (chiS) [Photobacterium sanguinicancri strain CECT 7579]
MKNITQFKRLQNTLMIAFLVLSITPLTLSALFFMNSHTKDLVEQSTSHLASLLDNKKKQLNNFFTAKESEAQSFARSELA
NASGGRFYGLVGAFHQLGELPSKLDDNNRSTYFTHTLTEKGKSINAHSTNYIGHERYRLMYKRYHWAFEEYLKRSDFSDI
MLVDIKGNVVYSVNHPERFGIGLNDPRFSGSELSNTFKAIKEQTSDMQSQPEQVPIAFTDFSANKDQSSQTAWFAAPVIQ
QGYLHSYVFFELSNKRISSLIADTPPTSNYVQTLLVGSDHQPRIPTTSEGSNPLNSESINQALEGNIGVGSFLNFSQTPV
LSAFSPINVLGNTWALVVELPEEEAFARIRQIEKIFLVAMITAIVLVIIASHLLSNSITAPLLRLTWAAERVSAGDLDQK
IEGIERSDEIGRLAVSFARMQRSVREKISLIRDQNTELEQNLKVIQQQNKELQVTDKLKDEFLATTSHELRTPLHGMVGI
AESLLAGANGPVQASQRRQLEMLINSGQRLTNLVDDLLDYHKMRYGDLDINKHAVDLSSATHLVLELSRHLVGSKPIRII
NQIPADLPPVLADEQRLEQVLYNLIGNAIKYTSEGKIVLSAMVLENQIRVQVVDTGQGIHPEQLEHIFEPLIQANTGSSH
YRQGAGLGLSISRQLIELMGGRLYVSSQPMVGATFSFTLNLASDQDIADSKLGNTNHFTAPTLGVSSCKDEALPNNPDGE
LLLIVDDEPVNLQVLNNFLRLEGYQVLTAESGPQALKLMDQHQPALILLDIMMPEMSGYEVCQHLRQQYDLRELPIIMLS
ALGQVQDRVKGFEYGANDYLAKPFNKEELIARIGAHIQAGKAEQQRQHNLVLQQEIDRREQVEEGLLETQTRLMGLLEST
SEAIVCVQNEGRVRYANAAAGKLFRRAPEQLERHNIDDILMTHLPDDISQSHHFNGQLTFRIGDELKALDTDVINLPEES
GLKRMFIFDNIGPSAQHRISELESAIDVLSGFAFDGDRNNLQQLRELGGEFTRLADKLGSDNKDKGSIVRELLVEVMKTT
LTTWEQTTQKTKFDLAEESGLWRVYLDRSTLQTRTLDKYLHVETLPKTPRWRTVLSTINFVMARCDEHSSAHQELMVKRD
KLQHLITQ

Nucleotide

• Length: 3387 bp

>NTDB_id=88783 OCU87_RS14485 WP_062691234.1 3148598..3151984(+) (chiS) [Photobacterium sanguinicancri strain CECT 7579]
ATGAAAAACATCACGCAATTTAAGCGCCTCCAAAATACCTTAATGATCGCTTTTTTAGTGCTCAGCATTACCCCCTTAAC
GCTGTCTGCGCTGTTTTTCATGAACTCACATACCAAAGATTTGGTTGAACAAAGTACCTCGCACCTAGCATCACTGCTTG
ATAATAAAAAGAAACAGCTTAATAACTTCTTTACGGCAAAAGAATCTGAAGCACAAAGTTTTGCTCGCTCAGAACTCGCC
AATGCCAGTGGCGGTCGATTTTATGGTTTAGTGGGTGCTTTCCATCAGCTAGGTGAACTCCCAAGCAAACTCGATGACAA
TAATCGCAGCACCTATTTCACCCATACGCTCACCGAAAAAGGCAAATCAATTAATGCGCATAGCACTAATTATATCGGCC
ACGAACGTTATCGATTAATGTACAAACGCTATCACTGGGCCTTTGAGGAATACTTAAAACGATCTGACTTTAGTGACATC
ATGCTGGTCGATATTAAGGGTAATGTGGTGTATTCCGTCAATCACCCTGAACGATTTGGCATTGGTTTAAACGATCCTCG
CTTTTCTGGCAGCGAGCTCAGCAACACCTTTAAAGCTATTAAAGAACAAACAAGTGATATGCAAAGCCAGCCTGAACAGG
TACCTATTGCATTCACTGACTTTTCAGCGAATAAAGATCAATCGTCACAAACGGCATGGTTTGCCGCGCCTGTTATTCAG
CAAGGCTACTTACACAGTTATGTCTTTTTTGAACTCAGTAATAAGCGGATCAGCTCCCTAATTGCAGACACACCACCCAC
CAGTAACTACGTGCAAACATTGCTAGTCGGCAGCGATCATCAGCCAAGGATCCCAACCACCAGCGAAGGCAGTAACCCAC
TAAACAGTGAGAGTATTAACCAAGCTCTCGAAGGAAATATCGGGGTCGGTAGCTTTTTAAACTTTAGTCAAACACCAGTA
CTCAGTGCCTTTTCCCCGATCAATGTTCTTGGTAACACTTGGGCTTTAGTGGTTGAACTTCCGGAAGAGGAAGCTTTTGC
TCGGATCCGTCAAATAGAAAAAATATTCCTCGTCGCCATGATCACCGCGATTGTGCTGGTCATCATTGCTTCGCATTTAC
TTTCCAATTCAATTACCGCCCCCCTATTGCGCCTTACCTGGGCTGCAGAACGGGTATCTGCAGGCGATTTAGATCAGAAA
ATTGAAGGTATTGAACGGAGTGATGAAATTGGCCGATTGGCCGTTAGTTTTGCCCGAATGCAACGCTCTGTCCGTGAAAA
AATAAGCCTAATCCGCGATCAAAATACCGAATTAGAACAAAACCTTAAAGTGATACAGCAACAAAACAAAGAACTTCAAG
TTACCGACAAGCTAAAAGATGAATTCCTTGCGACCACTTCGCATGAACTGCGTACCCCACTGCACGGCATGGTTGGCATT
GCAGAGTCCCTTTTAGCCGGTGCGAATGGCCCAGTACAAGCATCGCAGCGTCGTCAACTGGAGATGCTGATCAATAGTGG
CCAGCGATTAACAAACCTAGTGGATGATTTATTGGATTACCACAAGATGCGTTATGGCGATCTCGACATCAATAAACATG
CGGTGGATCTATCCTCTGCAACACATCTAGTACTTGAATTATCACGCCACTTGGTTGGCAGTAAACCAATTCGCATCATT
AACCAGATCCCTGCTGATTTGCCACCCGTTTTAGCTGATGAACAACGCTTAGAGCAAGTGCTTTATAACCTGATAGGCAA
TGCCATTAAGTACACCTCGGAAGGTAAAATTGTCTTGTCTGCAATGGTGCTAGAAAATCAGATCCGAGTCCAAGTGGTTG
ATACCGGACAAGGGATCCACCCAGAGCAACTGGAACACATTTTTGAACCCTTAATCCAAGCCAATACGGGATCATCACAC
TATAGACAAGGTGCAGGACTAGGCTTATCAATCAGCCGACAGTTGATCGAACTAATGGGCGGTCGCTTGTATGTCAGTAG
CCAGCCTATGGTAGGGGCGACATTTAGCTTCACCTTGAATCTTGCGAGTGACCAAGATATTGCAGACAGTAAGCTCGGCA
ATACCAACCATTTCACAGCACCTACATTGGGGGTTTCAAGTTGTAAAGATGAAGCACTACCAAATAATCCTGATGGTGAG
TTGCTACTGATAGTTGATGATGAGCCCGTGAATTTACAGGTGCTAAACAACTTTTTACGCCTTGAAGGTTACCAAGTGCT
CACGGCGGAAAGTGGTCCCCAAGCGCTTAAGTTAATGGATCAACATCAGCCAGCATTGATTCTGCTCGATATCATGATGC
CAGAAATGAGCGGCTATGAAGTATGCCAGCACTTACGCCAACAATATGACCTACGAGAGTTACCAATCATTATGCTCTCA
GCACTAGGACAAGTGCAGGATCGCGTCAAAGGCTTTGAGTATGGCGCCAATGACTATTTAGCAAAGCCGTTTAATAAAGA
AGAATTAATCGCTCGTATTGGAGCCCATATTCAAGCAGGGAAAGCCGAACAACAACGCCAGCATAACCTTGTTCTGCAAC
AAGAAATAGACCGCCGAGAACAAGTGGAAGAAGGGTTACTCGAAACCCAAACCCGTTTAATGGGTTTACTCGAATCGACC
AGCGAAGCCATTGTTTGTGTGCAAAATGAAGGGCGGGTACGTTACGCTAATGCAGCTGCAGGAAAGCTCTTTAGACGAGC
ACCGGAGCAGCTCGAACGCCATAATATTGATGATATATTGATGACCCACTTACCGGATGATATTAGCCAAAGTCACCATT
TTAATGGCCAGCTTACCTTCCGGATCGGTGATGAGCTCAAAGCGCTTGATACCGATGTGATCAATTTACCTGAAGAGTCA
GGGCTTAAGCGTATGTTTATCTTCGATAATATAGGCCCTTCTGCCCAACATCGTATCAGTGAGTTAGAAAGCGCTATTGA
TGTACTCTCTGGGTTTGCTTTTGATGGTGATAGAAATAACCTTCAGCAACTGCGTGAATTAGGTGGTGAATTTACGCGCC
TAGCGGATAAGCTTGGTAGTGATAACAAAGATAAAGGCAGTATCGTGCGTGAATTACTGGTGGAGGTAATGAAAACAACT
CTCACCACATGGGAGCAAACAACCCAAAAGACTAAATTCGATTTAGCCGAAGAAAGCGGATTATGGCGGGTTTACCTCGA
TCGAAGTACTTTACAGACACGTACATTAGATAAGTATCTACACGTTGAAACACTGCCTAAAACCCCCCGTTGGCGCACAG
TGCTCAGTACCATTAACTTTGTGATGGCACGCTGTGACGAGCATTCCAGCGCACATCAAGAACTGATGGTAAAACGCGAT
AAACTGCAGCACCTTATCACGCAATAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (373-425)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• Response regulator receiver domain (Response_reg) (723-833)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-681)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	57.422	99.734	0.573