Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   RUL31_RS07855 Genome accession   NZ_CP135964
Coordinates   1564131..1564595 (-) Length   154 a.a.
NCBI ID   WP_003327274.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CD303     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1559131..1569595
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RUL31_RS07835 (RUL31_07835) - 1559579..1561399 (+) 1821 WP_315916840.1 PAS domain-containing protein -
  RUL31_RS07840 (RUL31_07840) - 1561422..1562591 (-) 1170 WP_088117074.1 aminotransferase A -
  RUL31_RS07845 (RUL31_07845) - 1562797..1562958 (-) 162 WP_003327276.1 hypothetical protein -
  RUL31_RS07850 (RUL31_07850) cheV 1563167..1564078 (+) 912 WP_315916841.1 chemotaxis protein CheV -
  RUL31_RS07855 (RUL31_07855) kre 1564131..1564595 (-) 465 WP_003327274.1 YkyB family protein Regulator
  RUL31_RS07860 (RUL31_07860) - 1564718..1566013 (-) 1296 WP_315916842.1 MFS transporter -
  RUL31_RS07865 (RUL31_07865) - 1566089..1566586 (-) 498 WP_087941879.1 L,D-transpeptidase family protein -
  RUL31_RS07870 (RUL31_07870) - 1566722..1567582 (-) 861 WP_315916843.1 metallophosphoesterase -
  RUL31_RS07875 (RUL31_07875) fadH 1567729..1568493 (+) 765 WP_315916844.1 2,4-dienoyl-CoA reductase -
  RUL31_RS07880 (RUL31_07880) - 1568571..1568703 (+) 133 Protein_1507 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17942.68 Da        Isoelectric Point: 10.4207

>NTDB_id=887813 RUL31_RS07855 WP_003327274.1 1564131..1564595(-) (kre) [Bacillus atrophaeus strain CD303]
MDDHAYTKDLRPTIENLSKAVYTVNRHAKTAPNPKYLYTLKKRALQKLVKEGKGKKVGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKNLLQDYVGMKEKPFVTNRQQPTYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=887813 RUL31_RS07855 WP_003327274.1 1564131..1564595(-) (kre) [Bacillus atrophaeus strain CD303]
ATGGACGACCATGCATATACGAAAGATCTGCGGCCAACCATCGAAAATCTTTCAAAAGCTGTCTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATACTTTGAAAAAACGGGCTTTACAAAAGCTGGTGAAAGAAGGTAAAG
GAAAGAAAGTAGGGCTTCATTTTTCAAAAAATCCAAGGTTTAGCCAACAGCAATCGGACGTGCTCATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCGAACACCTTCCGCATTTAGGTACGCTAAATCAATCGTACCGGAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAAAACCTTTTGCAAGATTATGTCGGCATGAAAGAAAAGCCGTTTGTCA
CAAATCGGCAGCAGCCAACTTACCATAAACCTGTTTTCAAAAAGCTTGGAGAAAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

94.156

100

0.942