Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   RUL31_RS06235 Genome accession   NZ_CP135964
Coordinates   1279352..1280305 (+) Length   317 a.a.
NCBI ID   WP_315916724.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CD303     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1274352..1285305
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RUL31_RS06210 (RUL31_06210) argF 1276162..1277115 (+) 954 WP_315916722.1 ornithine carbamoyltransferase -
  RUL31_RS06215 (RUL31_06215) - 1277215..1277394 (+) 180 WP_003327605.1 YjzC family protein -
  RUL31_RS06220 (RUL31_06220) - 1277423..1277611 (-) 189 WP_003327604.1 YjzD family protein -
  RUL31_RS06225 (RUL31_06225) - 1277870..1278604 (+) 735 WP_063637420.1 hypothetical protein -
  RUL31_RS06230 (RUL31_06230) - 1278687..1279262 (+) 576 WP_315916723.1 hypothetical protein -
  RUL31_RS06235 (RUL31_06235) med 1279352..1280305 (+) 954 WP_315916724.1 BMP family ABC transporter substrate-binding protein Regulator
  RUL31_RS06240 (RUL31_06240) comZ 1280320..1280511 (+) 192 WP_010788228.1 ComZ family protein Regulator
  RUL31_RS06245 (RUL31_06245) - 1280541..1280768 (-) 228 WP_106359768.1 hypothetical protein -
  RUL31_RS06250 (RUL31_06250) fabH 1280940..1281878 (+) 939 WP_003327597.1 beta-ketoacyl-ACP synthase III -
  RUL31_RS06255 (RUL31_06255) fabF 1281900..1283138 (+) 1239 WP_061571216.1 beta-ketoacyl-ACP synthase II -
  RUL31_RS06260 (RUL31_06260) - 1283216..1284001 (+) 786 WP_010788231.1 DUF2268 domain-containing protein -
  RUL31_RS06265 (RUL31_06265) - 1284193..1285179 (+) 987 WP_010788232.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35412.92 Da        Isoelectric Point: 4.4868

>NTDB_id=887803 RUL31_RS06235 WP_315916724.1 1279352..1280305(+) (med) [Bacillus atrophaeus strain CD303]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLSIQSAYNVDVYYKEGVKTDEDILNAIED
YHKRGINLLFGHGSEYEEMFNLVSEDYPDMEFVISNAESKADNVTSVHLNGEAMGFFGGMTAAHMSKTNQIGVIASFKWQ
PEVDGFIKGAKYENPDITINTKYTDHWDDDTTAVKLYEKIKEEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYGIIAEQYSKGTLESGDHYFDFKDHVVEMGTFSPLVDKAFQDKIAALIKTYNRTDELPKKE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=887803 RUL31_RS06235 WP_315916724.1 1279352..1280305(+) (med) [Bacillus atrophaeus strain CD303]
ATGATCACTAGGCTTGTCATGATCTTTTCTGTCCTCCTGTTACTGAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGTATGCTCTTTCCCGATACCATCAATGATCTAGTGTGGGGAACAAAAGGGTATAAAGGTTTATTAAGTA
TACAATCTGCATATAATGTCGACGTCTACTATAAAGAAGGCGTTAAGACTGATGAGGATATATTAAACGCCATTGAAGAT
TACCACAAGAGAGGGATAAACCTTCTTTTTGGCCATGGCAGTGAATACGAAGAAATGTTTAATCTGGTCAGTGAGGATTA
CCCGGACATGGAATTTGTCATTTCTAACGCGGAATCAAAAGCCGACAACGTCACAAGCGTTCATCTTAACGGAGAAGCGA
TGGGGTTTTTCGGCGGGATGACAGCCGCACATATGTCCAAAACCAATCAAATCGGCGTGATTGCTTCTTTTAAATGGCAG
CCTGAAGTAGACGGCTTCATCAAAGGGGCCAAGTATGAAAATCCGGACATCACTATCAATACGAAATATACAGACCACTG
GGATGACGATACCACAGCCGTGAAGCTTTATGAGAAGATAAAAGAGGAAGGCGCGGATGTTGTATATCCCGCCGGAGATG
GGTATAATGTTCCTGTCATACAACAAATTAAAAAAGACGGTCTCTATGCGATCGGCTATGTCACAGACCAGTCTGATCTG
GGCGAAAATACCGTTTTGACAAGCACTGTTCAAAATGTGGACAAGGCCTATGGCATCATAGCCGAGCAATACAGCAAGGG
CACTTTGGAAAGCGGAGATCACTATTTCGATTTTAAAGATCATGTCGTTGAAATGGGGACATTCAGTCCTCTTGTTGACA
AAGCCTTCCAAGATAAAATTGCCGCTCTTATCAAAACGTATAATCGAACAGATGAACTGCCGAAAAAAGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

88.013

100

0.88