Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | AABJ69_RS05170 | Genome accession | NZ_AP027666 |
| Coordinates | 1046024..1046539 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130211.1 | Uniprot ID | A0ABR8T9Y4 |
| Organism | Escherichia coli strain PSS-04 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1041024..1051539
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABJ69_RS05125 (VEE17_09900) | csrA | 1041611..1041796 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| AABJ69_RS05155 (VEE17_09910) | yqaB | 1043254..1043820 (+) | 567 | WP_000273289.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| AABJ69_RS05160 (VEE17_09920) | yqaA | 1043817..1044245 (+) | 429 | WP_001287454.1 | YqaA family protein | - |
| AABJ69_RS05165 (VEE17_09930) | gshA | 1044318..1045874 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| AABJ69_RS05170 (VEE17_09940) | luxS | 1046024..1046539 (+) | 516 | WP_001130211.1 | S-ribosylhomocysteine lyase | Regulator |
| AABJ69_RS05175 (VEE17_09950) | emrB | 1046603..1048141 (-) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| AABJ69_RS05180 (VEE17_09960) | emrA | 1048158..1049330 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| AABJ69_RS05185 (VEE17_09970) | emrR | 1049457..1049987 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| AABJ69_RS05190 (VEE17_09980) | ygaH | 1050078..1050413 (-) | 336 | WP_000119766.1 | L-valine transporter subunit YgaH | - |
| AABJ69_RS05195 (VEE17_09990) | ygaZ | 1050436..1051140 (-) | 705 | WP_096851255.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19416.19 Da Isoelectric Point: 5.0362
>NTDB_id=88780 AABJ69_RS05170 WP_001130211.1 1046024..1046539(+) (luxS) [Escherichia coli strain PSS-04]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=88780 AABJ69_RS05170 WP_001130211.1 1046024..1046539(+) (luxS) [Escherichia coli strain PSS-04]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCA
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCA
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.099 |
100 |
0.731 |