Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RUL31_RS04720 Genome accession   NZ_CP135964
Coordinates   988286..989077 (+) Length   263 a.a.
NCBI ID   WP_004430590.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CD303     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 983286..994077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RUL31_RS04690 (RUL31_04690) - 984089..985144 (+) 1056 WP_390841146.1 FecCD family ABC transporter permease -
  RUL31_RS04695 (RUL31_04695) - 985261..986142 (+) 882 WP_315916627.1 PhzF family phenazine biosynthesis isomerase -
  RUL31_RS04700 (RUL31_04700) - 986223..986807 (+) 585 WP_315916628.1 nitroreductase -
  RUL31_RS04705 (RUL31_04705) - 986847..987038 (-) 192 WP_004430587.1 YfhD family protein -
  RUL31_RS04710 (RUL31_04710) - 987115..987225 (-) 111 WP_003223230.1 YfhE family protein -
  RUL31_RS04715 (RUL31_04715) - 987284..988195 (-) 912 WP_315916629.1 TIGR01777 family oxidoreductase -
  RUL31_RS04720 (RUL31_04720) recX 988286..989077 (+) 792 WP_004430590.1 recombination regulator RecX Regulator
  RUL31_RS04725 (RUL31_04725) - 989085..989411 (+) 327 WP_315916630.1 YfhH family protein -
  RUL31_RS04730 (RUL31_04730) - 989546..990745 (+) 1200 WP_010788006.1 MFS transporter -
  RUL31_RS04735 (RUL31_04735) - 990786..990938 (-) 153 WP_004430596.1 small, acid-soluble spore protein K -
  RUL31_RS04740 (RUL31_04740) - 991055..991324 (+) 270 WP_004430597.1 YfhJ family protein -
  RUL31_RS04745 (RUL31_04745) - 991452..991988 (+) 537 WP_094231666.1 SH3 domain-containing protein -
  RUL31_RS04750 (RUL31_04750) - 992129..992476 (+) 348 WP_010788008.1 SdpI family protein -
  RUL31_RS04755 (RUL31_04755) - 992463..993326 (+) 864 WP_315916631.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30952.20 Da        Isoelectric Point: 7.4549

>NTDB_id=887795 RUL31_RS04720 WP_004430590.1 988286..989077(+) (recX) [Bacillus atrophaeus strain CD303]
MPFITKITTQKKTTERFNIFLDNKYAFSVDADVLVKFDLKKGKELDDLDIVEIQYGDEVKKGFNRALEFLSYRMRSTKEV
TDHLKKKEISDPAITEIIHKLNDYRYLNDKEFAEAYASTHKKTNGKGPDVLYKELRSKGIDDDTIKETLSTFSFEEQTEE
ALKHIGKILKKEKKLSTKEIKQRAQMLLQRKGFSFDVITAALEQTEYANDEDTEREALRQHAEKALRKYRYDGSYESKMK
VKQYLFRKGFSLDMIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=887795 RUL31_RS04720 WP_004430590.1 988286..989077(+) (recX) [Bacillus atrophaeus strain CD303]
ATGCCGTTTATCACGAAAATCACAACGCAGAAAAAAACGACCGAGCGCTTTAACATTTTTCTCGATAATAAATATGCTTT
CAGTGTGGATGCGGACGTACTCGTCAAATTCGACCTGAAAAAAGGAAAAGAACTCGACGACCTTGATATCGTTGAAATTC
AATACGGGGATGAAGTAAAGAAAGGCTTTAACCGGGCGCTTGAATTTTTATCATACCGGATGCGCTCAACAAAAGAGGTA
ACGGACCATTTAAAGAAGAAAGAAATTTCAGATCCGGCCATTACAGAAATCATCCATAAGCTGAATGATTATCGCTATCT
GAATGATAAAGAGTTCGCAGAAGCTTATGCGAGCACACATAAGAAAACAAATGGAAAGGGACCGGACGTTCTTTATAAAG
AGTTAAGGTCAAAGGGGATCGACGATGATACGATCAAAGAGACATTGAGCACATTTTCTTTTGAGGAACAGACAGAAGAG
GCGCTGAAGCATATTGGAAAAATCCTAAAAAAAGAAAAAAAGCTCTCTACAAAAGAAATCAAGCAGCGAGCGCAAATGCT
TCTGCAGCGAAAGGGCTTCTCCTTCGACGTCATCACAGCGGCGCTTGAGCAGACCGAGTATGCAAACGATGAAGATACAG
AAAGGGAAGCGTTACGGCAGCATGCTGAAAAGGCGCTAAGAAAATACCGATATGACGGCTCCTACGAGAGCAAAATGAAG
GTAAAACAATATTTATTCAGAAAAGGATTCTCACTGGATATGATTGACCAATTTCTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

82.89

100

0.829