Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   RUL31_RS01975 Genome accession   NZ_CP135964
Coordinates   396457..396597 (+) Length   46 a.a.
NCBI ID   WP_315917015.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CD303     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 391457..401597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RUL31_RS01970 (RUL31_01970) - 393393..396416 (+) 3024 Protein_356 amino acid adenylation domain-containing protein -
  RUL31_RS01975 (RUL31_01975) comS 396457..396597 (+) 141 WP_315917015.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5324.26 Da        Isoelectric Point: 9.7882

>NTDB_id=887790 RUL31_RS01975 WP_315917015.1 396457..396597(+) (comS) [Bacillus atrophaeus strain CD303]
MNRFSKRLIKSIILYPQPSEGCISSISLDKQAQATTSLLYFCWKEK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=887790 RUL31_RS01975 WP_315917015.1 396457..396597(+) (comS) [Bacillus atrophaeus strain CD303]
TTGAACCGATTCAGCAAGCGCCTTATCAAGAGCATTATTCTGTATCCTCAGCCCAGCGAAGGATGTATATCCTCAATCAG
CTTGGACAAACAAGCACAAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

78.261

100

0.783