Detailed information NTG0887649

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: RS893_RS15245
• Genome accession: NZ_CP135918
• Coordinates: 3601891..3603300 (-)
• Length: 469 a.a.
• NCBI ID: WP_315791989.1
• Uniprot ID: -
• Organism: Fischerella sp. JS2
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3596891..3608300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RS893_RS15220	-	3597068..3598261 (-)	1194	WP_315784643.1	NAD(P)/FAD-dependent oxidoreductase	-
RS893_RS15225	-	3598485..3598796 (-)	312	WP_315791988.1	ChaB family protein	-
RS893_RS15230	-	3598976..3599107 (+)	132	WP_315784646.1	hypothetical protein	-
RS893_RS15235	-	3599129..3599800 (-)	672	WP_315784649.1	DUF2834 domain-containing protein	-
RS893_RS15240	-	3599805..3601283 (-)	1479	WP_315784651.1	carotenoid oxygenase family protein	-
RS893_RS15245	comA	3601891..3603300 (-)	1410	WP_315791989.1	phospholipase D-like domain-containing protein	Machinery gene
RS893_RS15250	-	3603473..3604639 (+)	1167	WP_315784654.1	cysteine desulfurase family protein	-
RS893_RS15255	-	3604821..3605573 (+)	753	WP_315784657.1	DUF1995 family protein	-
RS893_RS15260	-	3605779..3606201 (+)	423	WP_315784660.1	hypothetical protein	-
RS893_RS15265	-	3606311..3606886 (-)	576	WP_315784663.1	HD domain-containing protein	-
RS893_RS15270	-	3606968..3607198 (-)	231	WP_315784665.1	DUF433 domain-containing protein	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 53010.03 Da
• Isoelectric Point: 7.6266

>NTDB_id=887649 RS893_RS15245 WP_315791989.1 3601891..3603300(-) (comA) [Fischerella sp. JS2]
MSFFSTQWRFSSIFLVILTFSACQRAKFDNQRLKPLPQDPFVQVYFNHSQSSEYLEPYRHQAHQGDDLEQLIVETISQAK
STIDVAVQELRLPKIAQALVDKQKAGIKVRVILENNYSRPWSSFTANEVKKLDKREQERYQEYRLFADSNQDGNLSQEEI
TQTDALVILKQAKIPLINDTSDGSQGSSLMHHKFVVVDNRFVVVTSANFTMSDIHGDFTNTNSLGNANNLLKIDSPEIAD
LFTKEFNLMWGDGVGGKLDSKFGLQKPLQNSHQIILGDNQITVKFSPNSPTQPWNYSSNGLIGSTLNSANKSIDMALFVF
SEQRLANILEMRHNDNVKIRALIESGFAYRPYSEALDMMGVALTTKCQNQVDNHPWKNPITTVGVPVLAKGDLLHHKFAV
IDHKTVITGSHNWTKAGNNSNDETLLVIENPIVAAHYLREFDRIYANSRLGIPPKIQQKIKAQTKECQK

Nucleotide

• Length: 1410 bp

>NTDB_id=887649 RS893_RS15245 WP_315791989.1 3601891..3603300(-) (comA) [Fischerella sp. JS2]
GTGTCTTTTTTCTCTACCCAATGGCGTTTTTCTTCTATATTTTTAGTAATACTAACTTTCAGCGCTTGTCAACGAGCCAA
GTTTGACAATCAGCGGTTAAAACCACTACCGCAAGATCCATTTGTACAAGTTTACTTTAACCATTCTCAGTCTTCCGAAT
ACTTAGAACCTTATCGTCACCAAGCTCATCAGGGAGATGATTTAGAACAATTAATTGTTGAGACTATCTCCCAAGCAAAA
TCAACAATTGATGTGGCAGTGCAAGAATTACGTTTACCTAAAATAGCACAGGCACTTGTAGACAAGCAAAAAGCAGGCAT
AAAAGTTAGAGTAATTTTAGAAAATAATTATAGTCGTCCTTGGAGTAGTTTTACTGCTAACGAGGTGAAGAAATTAGATA
AAAGAGAACAAGAACGCTATCAAGAATATAGGTTATTTGCAGATAGTAACCAAGATGGAAACCTGAGCCAAGAAGAAATT
ACTCAGACAGATGCATTAGTAATTTTAAAGCAAGCCAAAATACCTTTGATAAATGACACCAGCGATGGTTCTCAGGGTAG
CAGCTTGATGCATCATAAATTTGTAGTTGTAGACAATCGTTTTGTGGTCGTCACCTCTGCTAACTTTACCATGAGTGATA
TCCACGGTGATTTTACTAATACTAACAGCTTGGGTAATGCTAATAATTTATTAAAAATTGACAGTCCCGAAATAGCAGAT
TTATTTACCAAAGAATTTAACCTGATGTGGGGTGACGGAGTGGGCGGTAAGCTTGACAGTAAATTTGGTTTGCAAAAACC
TCTACAAAATTCTCATCAAATTATCTTAGGCGATAATCAAATCACAGTCAAATTTTCACCGAACTCTCCCACACAGCCTT
GGAATTATAGCAGTAATGGTTTAATAGGTAGTACCTTAAATTCAGCAAATAAATCTATAGATATGGCTTTATTTGTATTT
TCTGAACAGCGTTTGGCAAACATACTCGAGATGCGCCACAACGATAATGTGAAAATTCGCGCCTTAATTGAATCGGGTTT
TGCCTATCGTCCCTACAGTGAAGCATTAGATATGATGGGGGTAGCTCTCACTACAAAATGTCAAAATCAAGTCGATAATC
ATCCTTGGAAAAATCCCATCACTACTGTAGGCGTACCTGTTTTAGCCAAAGGTGATTTATTGCATCACAAATTTGCCGTT
ATAGATCATAAAACAGTAATTACTGGTTCTCACAACTGGACAAAAGCAGGTAATAACAGTAATGATGAGACACTTTTAGT
AATCGAAAATCCCATAGTTGCCGCTCATTACCTAAGAGAATTTGACAGAATTTATGCCAATTCTAGATTAGGTATTCCAC
CAAAAATTCAGCAAAAAATCAAAGCACAAACGAAAGAGTGCCAGAAATAA

Domains

Predicted by InterproScan.

• PLD-like domain (PLDc_2) (72-250)

• PLD-like domain (PLDc_2) (305-444)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Synechocystis sp. PCC 6803	51.598	93.39	0.482