Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RS400_RS17850 Genome accession   NZ_CP135602
Coordinates   3807975..3808376 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain SI1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3802975..3813376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RS400_RS17835 (RS400_17835) - 3804986..3807022 (-) 2037 WP_005410715.1 methyl-accepting chemotaxis protein -
  RS400_RS17840 (RS400_17840) - 3807064..3807594 (-) 531 WP_005410716.1 chemotaxis protein CheW -
  RS400_RS17845 (RS400_17845) - 3807594..3807956 (-) 363 WP_005410717.1 response regulator -
  RS400_RS17850 (RS400_17850) pilG 3807975..3808376 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  RS400_RS17855 (RS400_17855) gshB 3808617..3809564 (+) 948 WP_005414251.1 glutathione synthase -
  RS400_RS17860 (RS400_17860) - 3809564..3810448 (+) 885 WP_049459282.1 energy transducer TonB -
  RS400_RS17865 (RS400_17865) - 3811061..3811975 (+) 915 WP_012479096.1 IS110-like element ISStma7 family transposase -
  RS400_RS17870 (RS400_17870) tsaB 3812174..3812887 (-) 714 WP_005410720.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=887149 RS400_RS17850 WP_005418455.1 3807975..3808376(-) (pilG) [Stenotrophomonas maltophilia strain SI1]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=887149 RS400_RS17850 WP_005418455.1 3807975..3808376(-) (pilG) [Stenotrophomonas maltophilia strain SI1]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677