Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   RSK81_RS02430 Genome accession   NZ_CP135591
Coordinates   473132..474889 (+) Length   585 a.a.
NCBI ID   WP_315687343.1    Uniprot ID   A0AA96SLQ7
Organism   Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 468132..479889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RSK81_RS02410 (RSK81_02410) scrK 469417..470316 (+) 900 WP_061592192.1 fructokinase ScrK -
  RSK81_RS02415 (RSK81_02415) - 470363..470773 (+) 411 WP_315687342.1 peptide deformylase -
  RSK81_RS02420 (RSK81_02420) - 470925..471383 (+) 459 WP_002911803.1 MarR family winged helix-turn-helix transcriptional regulator -
  RSK81_RS02425 (RSK81_02425) rcrP 471376..473142 (+) 1767 WP_032913362.1 ABC transporter ATP-binding protein Regulator
  RSK81_RS02430 (RSK81_02430) rcrQ 473132..474889 (+) 1758 WP_315687343.1 ABC transporter ATP-binding protein Regulator
  RSK81_RS02435 (RSK81_02435) - 475189..476547 (+) 1359 WP_002898269.1 cobyrinate a,c-diamide synthase -
  RSK81_RS02440 (RSK81_02440) cbiB 476549..477499 (+) 951 WP_002898268.1 adenosylcobinamide-phosphate synthase CbiB -
  RSK81_RS02445 (RSK81_02445) - 477509..478207 (+) 699 WP_002910554.1 cobalt-precorrin-8 methylmutase -
  RSK81_RS02450 (RSK81_02450) - 478208..478912 (+) 705 WP_315687345.1 cobalt-precorrin-8 methylmutase -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64367.34 Da        Isoelectric Point: 5.0060

>NTDB_id=887020 RSK81_RS02430 WP_315687343.1 473132..474889(+) (rcrQ) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
MENKKPSLFSQIRPYLKGLQLPLALAFVGAVLSNIITVYGPNKLKEITNLISDGLATSIDLKAVSQIALLLAVLYAVGAL
LNYAQSFIISTVIQYFSKRLRTAIAEKINKLPLGYFDGHSQGDTLSRVTNDVDTVGQSLNQSLGNVISASLLLVAVVLTM
FFMNWILALVTILATILGFVFVGLIMGKSQGYFTAQQNDLAAVNGYVEEMYSGHNVVTSYNAIEQSKERFAVLNHNLYNS
VWKSQFISSMMMPLMFFTGNFAYVLVILVGAALAINGSISIGIIVAFMVYVRTFSQPLSQIAQGITVLQQAGAALVRVLD
FLAEPEMEDDQHKEQQLAAVKGDVAFEDVFFGYKPDQTIIHDFSAQAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGR
ISIDGIDIKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQEHVTDEAVVAAAKAVGVHHFIMTLPQGYDTVLDDTVNL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGN
HEELMNQNGFYADLYNSQFVEEDAG

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=887020 RSK81_RS02430 WP_315687343.1 473132..474889(+) (rcrQ) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
ATGGAAAATAAGAAGCCTTCATTATTTAGCCAGATAAGGCCTTATCTCAAAGGCCTCCAGCTTCCTCTTGCTTTGGCATT
TGTGGGAGCTGTCTTGTCAAACATTATCACGGTCTATGGGCCAAATAAATTAAAAGAAATTACCAACCTCATCTCTGATG
GTCTGGCTACTAGCATTGATTTGAAAGCTGTGTCTCAGATTGCCCTTCTGCTGGCCGTGCTCTATGCAGTCGGAGCTCTG
CTCAACTACGCTCAGTCCTTTATCATCAGTACGGTTATCCAGTATTTCTCTAAGCGGCTGCGGACAGCCATTGCAGAGAA
GATTAACAAGCTACCGCTGGGCTATTTCGATGGTCATTCTCAGGGGGACACTCTGTCGCGCGTGACCAATGACGTGGATA
CAGTCGGCCAATCCCTCAACCAGAGTCTGGGGAATGTTATCTCTGCCAGTCTGCTCTTGGTGGCTGTGGTTTTGACCATG
TTCTTCATGAACTGGATCTTGGCTTTGGTAACTATCTTGGCTACTATACTCGGCTTTGTTTTTGTCGGGCTCATCATGGG
CAAGTCTCAGGGCTATTTCACCGCCCAGCAAAACGATCTGGCTGCGGTAAACGGTTATGTGGAGGAGATGTACTCTGGTC
ATAATGTTGTTACCAGCTATAATGCCATTGAGCAGTCTAAGGAACGCTTTGCGGTTCTCAATCACAATCTCTACAACAGT
GTTTGGAAGTCTCAATTTATCTCTAGTATGATGATGCCGCTCATGTTCTTTACGGGGAATTTTGCCTATGTGCTGGTTAT
TTTGGTTGGTGCTGCTCTGGCGATTAATGGCTCTATTAGCATCGGAATTATTGTCGCCTTTATGGTTTATGTGCGGACCT
TCTCTCAGCCTTTGTCACAGATTGCCCAAGGTATCACTGTCTTGCAGCAGGCTGGTGCAGCACTGGTTCGTGTCCTTGAC
TTTCTGGCTGAGCCGGAGATGGAAGACGACCAGCATAAAGAGCAGCAGCTTGCTGCTGTCAAGGGAGATGTTGCCTTTGA
AGATGTCTTCTTCGGTTACAAGCCAGACCAGACCATTATTCATGATTTCTCAGCCCAGGCCAAAGCCGGACAGAAGATTG
CCATTGTCGGCCCAACGGGTGCTGGTAAGACGACCATTGTTAATCTGCTCATGAAGTTCTATGAAATTGACAAAGGGCGT
ATCAGCATTGATGGTATAGATATTAAGGATATGAAACGTTCCGAGGTTCACGATGCCTTTTCAATGGTCTTGCAGGATAC
CTGGCTCTTTGAAGGAACTATCCGAGAAAACTTGATTTACAATCAGGAGCATGTGACAGATGAAGCAGTTGTTGCTGCAG
CGAAGGCGGTTGGTGTTCATCACTTTATCATGACCCTGCCGCAGGGCTATGATACGGTACTGGATGACACGGTCAACTTA
TCGGTCGGCCAGAAGCAGTTGCTGACAATCGCTCGTGCTCTACTGAAAGATGCGCCGCTCTTGATCTTGGATGAGGCAAC
TTCGTCAGTCGATACGCGGACGGAGGAGCTGATTCAAAAGGCTATGGACAAACTCATGGAAGGCCGGACTTCTTTTGTTA
TTGCCCACCGTCTGTCTACTATCCGTAATGCGGATCTTATCTTGGTCATGCGCGATGGAAATATCATCGAGCAGGGCAAC
CATGAAGAACTCATGAATCAGAATGGCTTCTATGCGGACCTCTATAATAGTCAATTTGTAGAGGAAGATGCAGGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

69.521

99.829

0.694