Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   RSK81_RS02425 Genome accession   NZ_CP135591
Coordinates   471376..473142 (+) Length   588 a.a.
NCBI ID   WP_032913362.1    Uniprot ID   A0AA96SKX4
Organism   Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 466376..478142
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RSK81_RS02405 (RSK81_02405) - 467245..469257 (+) 2013 WP_315687341.1 sucrose-specific PTS transporter subunit IIBC -
  RSK81_RS02410 (RSK81_02410) scrK 469417..470316 (+) 900 WP_061592192.1 fructokinase ScrK -
  RSK81_RS02415 (RSK81_02415) - 470363..470773 (+) 411 WP_315687342.1 peptide deformylase -
  RSK81_RS02420 (RSK81_02420) - 470925..471383 (+) 459 WP_002911803.1 MarR family winged helix-turn-helix transcriptional regulator -
  RSK81_RS02425 (RSK81_02425) rcrP 471376..473142 (+) 1767 WP_032913362.1 ABC transporter ATP-binding protein Regulator
  RSK81_RS02430 (RSK81_02430) rcrQ 473132..474889 (+) 1758 WP_315687343.1 ABC transporter ATP-binding protein Regulator
  RSK81_RS02435 (RSK81_02435) - 475189..476547 (+) 1359 WP_002898269.1 cobyrinate a,c-diamide synthase -
  RSK81_RS02440 (RSK81_02440) cbiB 476549..477499 (+) 951 WP_002898268.1 adenosylcobinamide-phosphate synthase CbiB -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65215.56 Da        Isoelectric Point: 5.0110

>NTDB_id=887019 RSK81_RS02425 WP_032913362.1 471376..473142(+) (rcrP) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
MFKLFKRLKVREVSMIVLSVLFTFLTVYLELEVPTYISTITELLQTSGTTLADLWEPGLKMIGLSFASLLSAIVVGFFAA
RIAASFTQSLRSDIFNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQTLITMGLQVVTRGPIMAIWAMTKIIGKSENWLIA
VLIAVLVNILMTVVLVTLAFPKQSVAQSLVDKLNSVTRESLTGIRVVRAYNAEDYQDEKFAAANDEVTRLNLFIGRLMAM
MNPVMMGISSGLTLAIYWIGAYLIQEAGLQERLPLFSDMVVFMSYAMQIVIGFLLMGALFIVLPRTIVSAGRINEVLDLH
SSITSPEQPKAAADSKGEVVFRDVSFRYAKNSEAVIEHVSFTAQAGDTVAFIGSTGSGKSTLVNLIPRFYDVTEGEILVD
GVNVQDYQLEDLHNKIGYIPQKAVLFSGDIESNLDFGQSQESPLDEQKMWDALDLAQAKPFVQEKEKGLKSEVAQSGTNF
SGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRKELAERTQDMTKLIVAQRISTIMDADQILVLDAGKVVGQGT
HRELLASNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=887019 RSK81_RS02425 WP_032913362.1 471376..473142(+) (rcrP) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
ATGTTTAAGTTATTTAAACGGCTGAAGGTAAGGGAAGTGAGCATGATTGTTCTCAGCGTGCTCTTCACCTTCCTAACAGT
ATATTTGGAATTAGAAGTTCCGACCTATATTTCGACGATTACAGAACTGCTGCAGACGTCGGGAACAACTTTGGCAGATT
TGTGGGAGCCAGGTCTGAAAATGATCGGTCTGTCTTTTGCTAGCTTGCTATCTGCTATTGTAGTTGGCTTTTTTGCCGCT
CGTATAGCAGCTAGCTTTACCCAGAGCTTGCGGAGCGATATTTTCAACCGTGTGCTGGACTATTCGCAGACGGAGATTAA
GAAATTTTCGATTCCTAGTTTGCTAACTCGGACAACGAATGACATTACTCAGGTGCAAACTTTAATTACCATGGGACTGC
AGGTGGTGACCAGGGGACCGATTATGGCGATTTGGGCCATGACCAAGATTATCGGTAAGTCCGAGAACTGGCTGATTGCT
GTTCTCATTGCTGTTCTTGTTAATATCCTGATGACAGTAGTTTTGGTTACACTGGCCTTTCCCAAGCAGTCAGTAGCGCA
GAGCTTGGTCGATAAGCTAAATAGCGTCACTAGAGAGAGTCTGACTGGGATTCGCGTGGTCCGGGCTTACAATGCTGAGG
ATTATCAGGATGAGAAATTTGCGGCGGCCAATGATGAAGTAACCCGGCTCAATCTTTTCATCGGTCGTCTGATGGCCATG
ATGAATCCAGTTATGATGGGGATTTCCAGCGGATTGACACTGGCTATTTACTGGATTGGTGCTTATTTGATCCAGGAGGC
TGGGCTGCAGGAGCGTCTCCCACTCTTCAGTGATATGGTCGTCTTTATGTCCTATGCTATGCAGATTGTGATTGGATTCT
TACTCATGGGTGCTCTCTTCATCGTCCTGCCTCGGACCATTGTATCCGCTGGCCGGATTAATGAAGTACTGGACCTGCAT
TCTTCTATCACCAGTCCGGAACAGCCTAAGGCAGCAGCAGATAGCAAGGGAGAAGTGGTCTTTCGAGATGTGTCCTTCCG
CTATGCTAAGAATTCTGAAGCGGTCATTGAGCATGTTAGCTTTACAGCGCAGGCCGGTGATACCGTGGCCTTTATTGGTT
CAACCGGTTCAGGGAAATCCACTCTTGTCAATCTCATCCCTCGTTTCTATGATGTAACTGAAGGAGAGATTTTGGTGGAC
GGTGTCAACGTTCAGGATTACCAGCTAGAAGACCTGCATAATAAGATCGGCTATATCCCGCAAAAGGCTGTGCTTTTCTC
TGGCGATATTGAGAGCAATCTGGACTTCGGTCAAAGCCAAGAAAGCCCGCTGGATGAGCAGAAAATGTGGGATGCTCTTG
ATCTAGCACAGGCTAAGCCCTTTGTCCAAGAGAAGGAAAAAGGGCTCAAGTCAGAAGTGGCTCAAAGCGGGACCAACTTC
TCTGGTGGGCAGCGTCAGCGTTTGGCCATTGCCAGGGCCTTGGCTCGTAAGCCAGAAATCCTCATCTTTGACGACTCCTT
CTCAGCCCTAGACTATAAGACAGACCGCATTTTGCGTAAGGAGCTGGCTGAGCGGACGCAGGATATGACCAAGCTGATCG
TAGCACAGCGGATTTCTACCATCATGGATGCGGATCAAATCTTGGTCTTGGATGCTGGTAAGGTAGTCGGTCAAGGTACC
CACCGAGAACTTTTGGCCAGCAACGAAGTCTATCAAGAAATTGCTTACTCACAACTATCCAAGGAGGAATTAGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-290)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.5

100

0.699