Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | AABK18_RS10145 | Genome accession | NZ_AP027652 |
| Coordinates | 2090950..2091465 (-) | Length | 171 a.a. |
| NCBI ID | WP_001130210.1 | Uniprot ID | B6I678 |
| Organism | Escherichia coli strain PSJ-42 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2085950..2096465
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABK18_RS10120 (VEE39_19430) | ygaZ | 2086349..2087086 (+) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
| AABK18_RS10125 (VEE39_19440) | ygaH | 2087076..2087411 (+) | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| AABK18_RS10130 (VEE39_19450) | emrR | 2087502..2088032 (+) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| AABK18_RS10135 (VEE39_19460) | emrA | 2088159..2089331 (+) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| AABK18_RS10140 (VEE39_19470) | emrB | 2089348..2090886 (+) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| AABK18_RS10145 (VEE39_19480) | luxS | 2090950..2091465 (-) | 516 | WP_001130210.1 | S-ribosylhomocysteine lyase | Regulator |
| AABK18_RS10150 (VEE39_19490) | gshA | 2091615..2093171 (-) | 1557 | WP_001402441.1 | glutamate--cysteine ligase | - |
| AABK18_RS10155 (VEE39_19500) | yqaA | 2093244..2093672 (-) | 429 | WP_001287454.1 | YqaA family protein | - |
| AABK18_RS10160 (VEE39_19510) | yqaB | 2093669..2094235 (-) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| AABK18_RS10185 (VEE39_19520) | csrA | 2095553..2095738 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19417.13 Da Isoelectric Point: 4.7556
>NTDB_id=88701 AABK18_RS10145 WP_001130210.1 2090950..2091465(-) (luxS) [Escherichia coli strain PSJ-42]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=88701 AABK18_RS10145 WP_001130210.1 2090950..2091465(-) (luxS) [Escherichia coli strain PSJ-42]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |