Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | RSK81_RS00880 | Genome accession | NZ_CP135591 |
| Coordinates | 160881..163310 (+) | Length | 809 a.a. |
| NCBI ID | WP_002926285.1 | Uniprot ID | - |
| Organism | Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 155881..168310
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RSK81_RS00850 (RSK81_00850) | - | 156579..157271 (-) | 693 | WP_125377914.1 | hypothetical protein | - |
| RSK81_RS00860 (RSK81_00860) | rpsB | 157778..158560 (+) | 783 | WP_002894015.1 | 30S ribosomal protein S2 | - |
| RSK81_RS00865 (RSK81_00865) | tsf | 158633..159676 (+) | 1044 | WP_002894014.1 | translation elongation factor Ts | - |
| RSK81_RS00870 (RSK81_00870) | - | 159781..160269 (-) | 489 | WP_315687072.1 | hypothetical protein | - |
| RSK81_RS00875 (RSK81_00875) | - | 160416..160880 (+) | 465 | WP_125377908.1 | CtsR family transcriptional regulator | - |
| RSK81_RS00880 (RSK81_00880) | clpC | 160881..163310 (+) | 2430 | WP_002926285.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| RSK81_RS00885 (RSK81_00885) | - | 163404..164147 (+) | 744 | WP_125377906.1 | DUF4272 domain-containing protein | - |
| RSK81_RS00890 (RSK81_00890) | - | 164190..164675 (+) | 486 | WP_002926282.1 | hypothetical protein | - |
| RSK81_RS00895 (RSK81_00895) | - | 164659..165060 (+) | 402 | WP_125377904.1 | DUF4430 domain-containing protein | - |
| RSK81_RS00900 (RSK81_00900) | - | 165247..166305 (+) | 1059 | WP_315687074.1 | AAA family ATPase | - |
| RSK81_RS00905 (RSK81_00905) | pnuC | 166326..167141 (+) | 816 | WP_268699437.1 | nicotinamide riboside transporter PnuC | - |
| RSK81_RS00910 (RSK81_00910) | - | 167196..167984 (+) | 789 | WP_315687077.1 | NUDIX hydrolase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89734.35 Da Isoelectric Point: 5.2508
>NTDB_id=887007 RSK81_RS00880 WP_002926285.1 160881..163310(+) (clpC) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
MKYSKALIESLEAAQLLAGHFTTDYLESWHLLIALANNPYSVAGSVLNEFPVEVDGFEEAAFQITGQAYQKDGHFELLPF
SYRLEELFEEAGQIAEAVRAKHVGTEHVLLAMLFDRGTLASRILEFTGFSYEDKEQGPKISDLRKVLEQRAGWGKEDIKA
IRSLNKGVMAAKQTMANMMGMPASTSGGLEDYTRDLTELARDGRLEPVIGRDQEISRIVQILSRKTKNNPVLVGDAGVGK
TALALGLAQRVAAGQVPAELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVSIEEPNVADSIAILQGLRKSYEDHHKVQISDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVQNRGTQNYEQSDLTPVDQALMAADFKKVSRLLEQEQQPKLYKLKVEEDDVL
ATLSGLSGIPVQKLTQTDAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKA
LAESLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
QLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFVARDIRLDHANMEKRMLEELKKAYRPEFINRIDEKVVFHSLSAE
DMQEVVKVMVKPLIVSLADKGIELKFQASALKLLAQEGYDVEMGARPLRRTLQTQVEDKLSELLLTGDLTTGQTLKVGVK
AGQLKFEMA
MKYSKALIESLEAAQLLAGHFTTDYLESWHLLIALANNPYSVAGSVLNEFPVEVDGFEEAAFQITGQAYQKDGHFELLPF
SYRLEELFEEAGQIAEAVRAKHVGTEHVLLAMLFDRGTLASRILEFTGFSYEDKEQGPKISDLRKVLEQRAGWGKEDIKA
IRSLNKGVMAAKQTMANMMGMPASTSGGLEDYTRDLTELARDGRLEPVIGRDQEISRIVQILSRKTKNNPVLVGDAGVGK
TALALGLAQRVAAGQVPAELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVSIEEPNVADSIAILQGLRKSYEDHHKVQISDQAIET
AVKYAHRYLTSKHLPDSAIDLLDEASATVQNRGTQNYEQSDLTPVDQALMAADFKKVSRLLEQEQQPKLYKLKVEEDDVL
ATLSGLSGIPVQKLTQTDAKKYLNLETELHKRVIGQDEAISAISRAIRRNQSGIRSSKRPIGSFMFLGPTGVGKTELAKA
LAESLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
QLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFVARDIRLDHANMEKRMLEELKKAYRPEFINRIDEKVVFHSLSAE
DMQEVVKVMVKPLIVSLADKGIELKFQASALKLLAQEGYDVEMGARPLRRTLQTQVEDKLSELLLTGDLTTGQTLKVGVK
AGQLKFEMA
Nucleotide
Download Length: 2430 bp
>NTDB_id=887007 RSK81_RS00880 WP_002926285.1 160881..163310(+) (clpC) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
ATGAAATACTCAAAAGCCTTAATAGAAAGCTTGGAAGCAGCCCAGCTCTTGGCCGGCCATTTTACGACAGATTATCTGGA
ATCATGGCATCTGCTGATTGCTCTGGCTAATAATCCCTACAGCGTTGCTGGCTCAGTCCTCAATGAGTTTCCTGTGGAAG
TTGATGGATTTGAAGAAGCGGCTTTTCAGATTACTGGTCAGGCTTATCAGAAAGACGGTCACTTCGAGCTGCTGCCTTTT
TCTTATCGCTTAGAGGAGCTGTTTGAGGAAGCGGGGCAGATTGCAGAAGCTGTTCGGGCTAAGCATGTAGGTACTGAGCA
TGTGCTGCTGGCCATGCTATTTGACCGGGGGACCTTGGCCTCTCGTATTCTGGAATTTACCGGCTTTAGCTACGAGGACA
AAGAGCAGGGGCCGAAAATCAGTGATTTGCGAAAGGTCTTGGAGCAGCGAGCTGGCTGGGGCAAGGAAGATATCAAGGCT
ATTCGCAGTCTGAATAAGGGAGTAATGGCCGCTAAGCAGACCATGGCCAATATGATGGGTATGCCAGCTTCTACCAGCGG
GGGGCTAGAAGACTACACTCGAGATTTGACGGAGCTGGCTAGAGATGGCCGATTGGAGCCCGTAATTGGCCGTGATCAGG
AAATTTCACGAATAGTTCAGATTCTCAGTCGCAAGACTAAAAACAATCCAGTGCTGGTTGGAGATGCTGGGGTTGGTAAG
ACAGCTCTGGCTTTAGGTCTGGCCCAGCGTGTGGCAGCTGGTCAGGTTCCTGCTGAACTTGCCAAGATGCGGGTTTTGGA
ACTGGACTTGATGAATGTAGTTGCTGGAACTCGCTTTCGCGGAGATTTCGAGGAGCGGATGAACAACATCATCAATGACA
TTGAAGAAGATGGTCATGTTATTCTTTTCATCGATGAACTTCATACCATCATGGGCTCTGGCAGCGGTATTGACTCAACC
TTGGATGCGGCCAATATCCTGAAACCGGCTCTGGCTCGCGGAACTCTGCGGACAGTTGGCGCTACGACGCAGGAAGAGTA
CCAGAAACATATTGAAAAAGATGCGGCCCTTTCCCGGCGTTTTGCCAAGGTCAGCATAGAAGAGCCTAATGTGGCTGACA
GCATTGCTATTTTACAAGGCTTGAGAAAGAGCTATGAGGACCATCACAAGGTGCAGATTAGTGATCAAGCGATTGAGACG
GCGGTGAAATATGCCCATCGCTATCTGACTAGCAAGCATCTGCCGGACTCTGCCATTGATCTTTTGGACGAGGCCAGTGC
GACAGTGCAGAATAGAGGGACACAGAATTACGAGCAGTCGGATTTGACGCCAGTGGATCAAGCCTTGATGGCAGCGGACT
TTAAAAAGGTGTCGAGGCTGCTTGAGCAAGAGCAGCAACCCAAGCTCTATAAACTGAAAGTGGAAGAAGACGATGTCTTG
GCTACTCTTAGTGGCTTGTCTGGGATTCCTGTGCAGAAGCTGACTCAGACAGATGCGAAGAAATACCTCAATTTGGAAAC
AGAACTGCATAAACGCGTGATTGGGCAGGACGAGGCGATTTCAGCTATCAGCCGAGCTATCCGACGGAACCAGTCTGGTA
TCCGCAGCAGCAAGCGGCCGATCGGATCTTTTATGTTCCTAGGTCCGACAGGAGTCGGGAAGACAGAGCTAGCCAAGGCT
TTGGCCGAAAGTCTCTTTGATGACGAGTCTGCTCTCATACGATTTGATATGAGTGAGTACATGGAGAAATTCGCGGCTAG
TCGCCTCAACGGAGCGCCTCCAGGCTATGTAGGCTATGAAGAAGGAGGGGAGCTGACGGAAAAGGTGCGCAACCGACCTT
ATTCTGTCCTGCTCTTTGACGAAGTGGAAAAGGCGCATCCAGATATTTTCAATGTCCTCCTGCAGGTCTTGGATGATGGT
CAACTGACTGACAGCAAGGGCCGCAAGGTGGACTTCTCCAACACGATTATTATCATGACCAGCAATCTGGGGGCAACTAG
TTTGCGGGATGATAAGACGGTGGGCTTTGTAGCGCGGGATATTCGCTTGGACCATGCCAATATGGAAAAACGGATGCTGG
AAGAGCTTAAGAAAGCTTATCGACCAGAGTTTATCAACCGTATCGACGAAAAGGTAGTTTTCCACAGCTTATCTGCAGAA
GATATGCAGGAAGTGGTCAAGGTTATGGTCAAACCGCTCATTGTCAGTCTTGCTGATAAGGGAATTGAGCTGAAGTTCCA
GGCTAGTGCCCTTAAGCTGCTGGCTCAGGAAGGCTACGATGTGGAAATGGGGGCACGGCCATTGCGCCGCACTCTGCAGA
CCCAGGTAGAGGACAAGTTGTCTGAGCTACTTTTGACAGGAGATTTGACAACGGGTCAAACTCTTAAGGTCGGAGTCAAA
GCTGGCCAACTCAAGTTTGAAATGGCCTAG
ATGAAATACTCAAAAGCCTTAATAGAAAGCTTGGAAGCAGCCCAGCTCTTGGCCGGCCATTTTACGACAGATTATCTGGA
ATCATGGCATCTGCTGATTGCTCTGGCTAATAATCCCTACAGCGTTGCTGGCTCAGTCCTCAATGAGTTTCCTGTGGAAG
TTGATGGATTTGAAGAAGCGGCTTTTCAGATTACTGGTCAGGCTTATCAGAAAGACGGTCACTTCGAGCTGCTGCCTTTT
TCTTATCGCTTAGAGGAGCTGTTTGAGGAAGCGGGGCAGATTGCAGAAGCTGTTCGGGCTAAGCATGTAGGTACTGAGCA
TGTGCTGCTGGCCATGCTATTTGACCGGGGGACCTTGGCCTCTCGTATTCTGGAATTTACCGGCTTTAGCTACGAGGACA
AAGAGCAGGGGCCGAAAATCAGTGATTTGCGAAAGGTCTTGGAGCAGCGAGCTGGCTGGGGCAAGGAAGATATCAAGGCT
ATTCGCAGTCTGAATAAGGGAGTAATGGCCGCTAAGCAGACCATGGCCAATATGATGGGTATGCCAGCTTCTACCAGCGG
GGGGCTAGAAGACTACACTCGAGATTTGACGGAGCTGGCTAGAGATGGCCGATTGGAGCCCGTAATTGGCCGTGATCAGG
AAATTTCACGAATAGTTCAGATTCTCAGTCGCAAGACTAAAAACAATCCAGTGCTGGTTGGAGATGCTGGGGTTGGTAAG
ACAGCTCTGGCTTTAGGTCTGGCCCAGCGTGTGGCAGCTGGTCAGGTTCCTGCTGAACTTGCCAAGATGCGGGTTTTGGA
ACTGGACTTGATGAATGTAGTTGCTGGAACTCGCTTTCGCGGAGATTTCGAGGAGCGGATGAACAACATCATCAATGACA
TTGAAGAAGATGGTCATGTTATTCTTTTCATCGATGAACTTCATACCATCATGGGCTCTGGCAGCGGTATTGACTCAACC
TTGGATGCGGCCAATATCCTGAAACCGGCTCTGGCTCGCGGAACTCTGCGGACAGTTGGCGCTACGACGCAGGAAGAGTA
CCAGAAACATATTGAAAAAGATGCGGCCCTTTCCCGGCGTTTTGCCAAGGTCAGCATAGAAGAGCCTAATGTGGCTGACA
GCATTGCTATTTTACAAGGCTTGAGAAAGAGCTATGAGGACCATCACAAGGTGCAGATTAGTGATCAAGCGATTGAGACG
GCGGTGAAATATGCCCATCGCTATCTGACTAGCAAGCATCTGCCGGACTCTGCCATTGATCTTTTGGACGAGGCCAGTGC
GACAGTGCAGAATAGAGGGACACAGAATTACGAGCAGTCGGATTTGACGCCAGTGGATCAAGCCTTGATGGCAGCGGACT
TTAAAAAGGTGTCGAGGCTGCTTGAGCAAGAGCAGCAACCCAAGCTCTATAAACTGAAAGTGGAAGAAGACGATGTCTTG
GCTACTCTTAGTGGCTTGTCTGGGATTCCTGTGCAGAAGCTGACTCAGACAGATGCGAAGAAATACCTCAATTTGGAAAC
AGAACTGCATAAACGCGTGATTGGGCAGGACGAGGCGATTTCAGCTATCAGCCGAGCTATCCGACGGAACCAGTCTGGTA
TCCGCAGCAGCAAGCGGCCGATCGGATCTTTTATGTTCCTAGGTCCGACAGGAGTCGGGAAGACAGAGCTAGCCAAGGCT
TTGGCCGAAAGTCTCTTTGATGACGAGTCTGCTCTCATACGATTTGATATGAGTGAGTACATGGAGAAATTCGCGGCTAG
TCGCCTCAACGGAGCGCCTCCAGGCTATGTAGGCTATGAAGAAGGAGGGGAGCTGACGGAAAAGGTGCGCAACCGACCTT
ATTCTGTCCTGCTCTTTGACGAAGTGGAAAAGGCGCATCCAGATATTTTCAATGTCCTCCTGCAGGTCTTGGATGATGGT
CAACTGACTGACAGCAAGGGCCGCAAGGTGGACTTCTCCAACACGATTATTATCATGACCAGCAATCTGGGGGCAACTAG
TTTGCGGGATGATAAGACGGTGGGCTTTGTAGCGCGGGATATTCGCTTGGACCATGCCAATATGGAAAAACGGATGCTGG
AAGAGCTTAAGAAAGCTTATCGACCAGAGTTTATCAACCGTATCGACGAAAAGGTAGTTTTCCACAGCTTATCTGCAGAA
GATATGCAGGAAGTGGTCAAGGTTATGGTCAAACCGCTCATTGTCAGTCTTGCTGATAAGGGAATTGAGCTGAAGTTCCA
GGCTAGTGCCCTTAAGCTGCTGGCTCAGGAAGGCTACGATGTGGAAATGGGGGCACGGCCATTGCGCCGCACTCTGCAGA
CCCAGGTAGAGGACAAGTTGTCTGAGCTACTTTTGACAGGAGATTTGACAACGGGTCAAACTCTTAAGGTCGGAGTCAAA
GCTGGCCAACTCAAGTTTGAAATGGCCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
77.284 |
100 |
0.774 |
| clpC | Streptococcus pneumoniae D39 |
77.284 |
100 |
0.774 |
| clpC | Streptococcus pneumoniae TIGR4 |
77.284 |
100 |
0.774 |
| clpC | Streptococcus mutans UA159 |
68.148 |
100 |
0.682 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.831 |
100 |
0.67 |
| clpC | Streptococcus thermophilus LMD-9 |
66.708 |
100 |
0.669 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.605 |
100 |
0.517 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.387 |
99.135 |
0.45 |
| clpE | Streptococcus mutans UA159 |
47.343 |
76.761 |
0.363 |