Detailed information
Bioinformatically predicted
Overview
| Name | recB | Type | Machinery gene |
| Locus tag | RRV97_RS01840 | Genome accession | NZ_CP135440 |
| Coordinates | 378111..381767 (-) | Length | 1218 a.a. |
| NCBI ID | WP_315611789.1 | Uniprot ID | A0AA96SDR4 |
| Organism | Neisseria sp. DTU_2021_1001991_1_SI_NGA_ILE_055 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 373111..386767
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RRV97_RS01820 (RRV97_01820) | - | 373937..374773 (-) | 837 | WP_315611787.1 | DUF4198 domain-containing protein | - |
| RRV97_RS01825 (RRV97_01825) | - | 375026..376069 (+) | 1044 | WP_315612222.1 | sulfate ABC transporter substrate-binding protein | - |
| RRV97_RS01830 (RRV97_01830) | dinB | 376147..377205 (+) | 1059 | WP_314576830.1 | DNA polymerase IV | - |
| RRV97_RS01835 (RRV97_01835) | - | 377321..378052 (+) | 732 | WP_315611788.1 | phosphoadenylyl-sulfate reductase | - |
| RRV97_RS01840 (RRV97_01840) | recB | 378111..381767 (-) | 3657 | WP_315611789.1 | exodeoxyribonuclease V subunit beta | Machinery gene |
| RRV97_RS01845 (RRV97_01845) | - | 381913..385671 (-) | 3759 | WP_315611790.1 | hemagglutinin repeat-containing protein | - |
Sequence
Protein
Download Length: 1218 a.a. Molecular weight: 138500.89 Da Isoelectric Point: 5.9303
>NTDB_id=886621 RRV97_RS01840 WP_315611789.1 378111..381767(-) (recB) [Neisseria sp. DTU_2021_1001991_1_SI_NGA_ILE_055]
MSSALPFDALTLSIDGTNLIEASAGTGKTYGIAALFTRLIILEKKDIEKILVVTFTKAATAELKTRLRARLDEVLQVLNE
IQTLGGKPEHISDGLNKYYEKEKKSPDDFLNRLIPLALGEQDGQESCHRLILRLKAALSQFDNASIYTIHGFCQRVLRDY
AFLCGAPLDVELSDDSRERLLIPAQDFWRQKVATDATLAQLVFDRKCTPEEMLAEIKSYTGRPYLKFRRPEGDLQEAQAK
LQETWQKICVHLEDLEKAFWAIFPKLNGQTYRRKTFENVFTDLKTNAESNRLPRLSKQTLEKLSLFSIDTLNIKLKKEYK
ADADAPEIIQLQALANLGRNLQAMKSAEEAVFICLQLDLLSYINQSIAEQKKSRRERVFDDLLLDVHQALTTNEHGNALA
KAAAANWEIALIDEFQDTDPLQYEIFRQIFIEQSCPLFLVGDPKQAIYSFRGADIYAYLQAAQDADRHYTLAVNYRSHAK
LINGISALFKQKKHPFVLKNIDYSEVSASRAESRLSPHRPAIQVRWLNTDDQTGKEILRSRAAEYCADEIAFALNEAAEG
RLNFKGRALESGDIAVLVRTNNEAAMIARKLKQRRIQSVLLSRQSVFDSAEADSLSALIGFWLNPRQTDWLRFVLTGVLF
GYTAKEIYELNHNEHQLLKWLESSAEALEKWRKGGIFAAVQQFAARHDIETRLLKGGNERSLTNYYQILELLAEEDSQSR
NPAALHKWLNEQISRARSGHFPSDAQTIRLESDEKLVKIVTMHASKGLQYPLVYCPFAWDTKDNSKENWKILHTDNHETE
LLAKSQTSEAELSHLADEKTAEDLRLLYVALTRAEEQLNIYAAANKNCTPNNPFAYLLEGLPEAGRESVSQSYQSTTDVV
EMLKTNWQRFIKNAPENTEFTFTEEAPPETVYQYSHQQDQALSAQSIKRRDFDFIRHTSFTGLSRHTKSSDEQHEPLQPA
IDPAESADRAMPSENLPPPLSDGLDIHHFPRGTNAGVCLHEILEKLDFAASAESQSEMIAEVLQRHSFEDKWLPTVSAML
DICRLTPLINESLSQIPPTRRLPEMGFTLYMDDFKLDDLRRWFASSEANLPPECVQAAQLLDFHDLQGYLNGFIDMVCQD
SDGHVVLIDYKSNHLGNDASAYTQQAMNEAVAHHHYYLQALIYAVAIARYYALRGKPLPKIAIRYLFLRGMDGSDRGIWK
WDIDTALLSTFVERKTNS
MSSALPFDALTLSIDGTNLIEASAGTGKTYGIAALFTRLIILEKKDIEKILVVTFTKAATAELKTRLRARLDEVLQVLNE
IQTLGGKPEHISDGLNKYYEKEKKSPDDFLNRLIPLALGEQDGQESCHRLILRLKAALSQFDNASIYTIHGFCQRVLRDY
AFLCGAPLDVELSDDSRERLLIPAQDFWRQKVATDATLAQLVFDRKCTPEEMLAEIKSYTGRPYLKFRRPEGDLQEAQAK
LQETWQKICVHLEDLEKAFWAIFPKLNGQTYRRKTFENVFTDLKTNAESNRLPRLSKQTLEKLSLFSIDTLNIKLKKEYK
ADADAPEIIQLQALANLGRNLQAMKSAEEAVFICLQLDLLSYINQSIAEQKKSRRERVFDDLLLDVHQALTTNEHGNALA
KAAAANWEIALIDEFQDTDPLQYEIFRQIFIEQSCPLFLVGDPKQAIYSFRGADIYAYLQAAQDADRHYTLAVNYRSHAK
LINGISALFKQKKHPFVLKNIDYSEVSASRAESRLSPHRPAIQVRWLNTDDQTGKEILRSRAAEYCADEIAFALNEAAEG
RLNFKGRALESGDIAVLVRTNNEAAMIARKLKQRRIQSVLLSRQSVFDSAEADSLSALIGFWLNPRQTDWLRFVLTGVLF
GYTAKEIYELNHNEHQLLKWLESSAEALEKWRKGGIFAAVQQFAARHDIETRLLKGGNERSLTNYYQILELLAEEDSQSR
NPAALHKWLNEQISRARSGHFPSDAQTIRLESDEKLVKIVTMHASKGLQYPLVYCPFAWDTKDNSKENWKILHTDNHETE
LLAKSQTSEAELSHLADEKTAEDLRLLYVALTRAEEQLNIYAAANKNCTPNNPFAYLLEGLPEAGRESVSQSYQSTTDVV
EMLKTNWQRFIKNAPENTEFTFTEEAPPETVYQYSHQQDQALSAQSIKRRDFDFIRHTSFTGLSRHTKSSDEQHEPLQPA
IDPAESADRAMPSENLPPPLSDGLDIHHFPRGTNAGVCLHEILEKLDFAASAESQSEMIAEVLQRHSFEDKWLPTVSAML
DICRLTPLINESLSQIPPTRRLPEMGFTLYMDDFKLDDLRRWFASSEANLPPECVQAAQLLDFHDLQGYLNGFIDMVCQD
SDGHVVLIDYKSNHLGNDASAYTQQAMNEAVAHHHYYLQALIYAVAIARYYALRGKPLPKIAIRYLFLRGMDGSDRGIWK
WDIDTALLSTFVERKTNS
Nucleotide
Download Length: 3657 bp
>NTDB_id=886621 RRV97_RS01840 WP_315611789.1 378111..381767(-) (recB) [Neisseria sp. DTU_2021_1001991_1_SI_NGA_ILE_055]
ATGTCTTCCGCCCTTCCTTTTGACGCGCTCACCCTTTCCATCGACGGCACCAACCTCATCGAAGCCTCCGCCGGTACGGG
TAAAACCTACGGCATTGCCGCGCTCTTTACCCGACTGATTATTTTAGAAAAAAAAGACATCGAGAAAATTCTGGTCGTTA
CCTTTACCAAAGCGGCAACGGCAGAACTGAAAACCCGTTTGCGCGCGCGTTTGGACGAAGTGTTGCAGGTTTTAAACGAA
ATCCAAACCTTGGGCGGCAAGCCGGAACATATTTCAGACGGCCTGAACAAATATTACGAAAAAGAGAAAAAATCCCCCGA
TGACTTTCTCAATCGCTTGATTCCTTTGGCTTTAGGCGAGCAAGACGGACAGGAAAGCTGCCATCGCCTGATTCTCCGCC
TCAAAGCCGCACTGAGCCAGTTTGACAACGCATCGATTTACACCATCCACGGCTTCTGTCAGCGCGTCTTGCGCGATTAC
GCGTTTTTGTGCGGCGCGCCTTTGGATGTCGAGCTGTCGGACGACTCACGCGAGAGGCTGCTGATTCCTGCGCAGGACTT
TTGGCGGCAGAAAGTGGCAACCGATGCCACATTGGCACAATTGGTTTTTGACCGGAAATGCACGCCCGAAGAAATGCTTG
CCGAAATCAAAAGCTATACCGGCCGCCCCTATCTGAAATTCAGACGGCCTGAAGGCGATTTGCAAGAAGCTCAAGCCAAG
CTTCAAGAAACATGGCAAAAAATTTGCGTCCACTTGGAAGACTTGGAAAAAGCGTTTTGGGCAATTTTTCCCAAACTGAA
CGGCCAAACCTACAGAAGAAAAACCTTTGAAAATGTTTTTACTGATCTAAAAACAAACGCCGAATCCAACCGTCTGCCCC
GCCTGAGCAAACAAACGCTGGAAAAATTAAGCCTCTTCAGTATCGACACGCTCAACATCAAACTGAAAAAAGAATATAAA
GCCGATGCCGATGCGCCGGAAATTATTCAGCTGCAAGCCTTGGCTAATCTTGGCCGTAATTTGCAGGCAATGAAAAGCGC
GGAAGAAGCAGTCTTCATCTGCCTGCAACTCGACCTCCTTTCCTACATCAATCAGTCCATTGCTGAACAAAAAAAATCAC
GCCGCGAGCGCGTGTTTGATGATTTGCTGCTGGACGTCCATCAGGCATTGACCACCAATGAACACGGCAACGCATTGGCA
AAAGCGGCAGCGGCAAACTGGGAAATCGCGCTGATTGACGAATTCCAAGATACCGACCCGTTGCAATACGAAATTTTCCG
CCAAATTTTTATCGAACAAAGCTGCCCGCTGTTTCTCGTTGGCGACCCCAAACAGGCGATTTACAGCTTTCGCGGTGCGG
ACATTTACGCCTATCTGCAAGCCGCGCAAGATGCGGACAGGCATTACACTCTCGCCGTCAACTACCGCAGCCATGCCAAG
CTGATCAACGGCATCAGCGCCTTGTTCAAACAAAAAAAACACCCCTTCGTATTGAAAAACATCGATTACAGCGAGGTCTC
CGCCAGCCGTGCCGAAAGCCGGCTGTCGCCACACCGCCCCGCCATCCAAGTGCGCTGGCTCAATACGGACGATCAAACCG
GCAAAGAGATTTTGCGCAGCCGAGCAGCCGAATATTGCGCCGATGAAATTGCCTTTGCGCTCAATGAAGCAGCCGAAGGC
CGTCTGAATTTCAAAGGCCGCGCGTTGGAATCCGGCGACATTGCCGTCTTGGTGCGCACCAACAACGAAGCGGCGATGAT
TGCCAGAAAACTGAAACAGCGCCGTATCCAAAGCGTGTTGCTGTCGCGCCAGTCCGTTTTCGATTCCGCCGAGGCCGACT
CGCTGTCCGCGTTGATCGGCTTTTGGCTCAACCCAAGGCAAACCGACTGGCTGCGCTTTGTCTTGACCGGCGTTTTGTTC
GGCTATACCGCCAAAGAGATTTACGAACTCAACCACAACGAACACCAGCTGCTCAAATGGCTGGAGTCGTCAGCCGAAGC
CTTGGAAAAATGGCGGAAAGGCGGCATTTTTGCCGCCGTGCAGCAGTTTGCCGCCCGACATGACATCGAAACACGCCTGC
TTAAAGGCGGCAACGAACGCAGTCTGACCAATTACTACCAAATTCTGGAGCTTTTGGCCGAAGAAGACAGCCAAAGCCGA
AACCCCGCCGCCCTGCATAAATGGTTAAACGAACAAATCAGCCGTGCGCGCAGCGGCCATTTCCCGTCAGACGCGCAAAC
CATCCGTCTTGAAAGCGACGAAAAATTGGTCAAAATCGTTACCATGCACGCGTCGAAAGGTTTGCAATATCCTTTGGTTT
ACTGCCCCTTCGCATGGGATACCAAAGACAATTCCAAAGAAAACTGGAAAATCCTGCATACTGACAACCACGAAACCGAG
CTGCTGGCGAAATCGCAAACCTCGGAAGCGGAACTAAGCCATCTGGCCGACGAAAAGACGGCGGAAGATTTACGCCTGCT
CTATGTCGCCCTTACCCGCGCCGAAGAACAGCTCAACATCTACGCCGCCGCCAACAAAAACTGTACGCCGAACAATCCTT
TTGCCTATCTGCTCGAAGGCTTGCCAGAGGCCGGCCGCGAAAGCGTCAGCCAAAGCTATCAAAGCACGACAGATGTTGTA
GAAATGCTCAAAACCAACTGGCAACGCTTTATCAAAAACGCGCCCGAAAATACGGAATTCACCTTCACGGAAGAAGCCCC
GCCGGAAACCGTCTATCAATACAGCCACCAACAAGACCAAGCTTTGAGCGCACAGAGCATTAAACGCCGCGATTTTGACT
TTATCCGCCACACCAGCTTTACCGGTTTGAGCAGGCATACCAAGTCAAGCGATGAGCAACACGAGCCTTTGCAACCTGCC
ATCGATCCGGCAGAAAGCGCAGACCGTGCCATGCCGTCTGAAAACCTGCCGCCCCCGCTTTCAGACGGCCTCGATATCCA
CCATTTTCCCCGCGGCACCAATGCCGGCGTATGTTTGCATGAAATACTGGAAAAACTCGACTTTGCCGCCTCTGCCGAGA
GCCAATCCGAAATGATTGCCGAAGTTTTGCAACGCCACAGCTTTGAAGACAAATGGCTGCCGACGGTAAGCGCTATGCTC
GACATCTGCCGCCTGACGCCTTTAATCAACGAGAGCCTGTCGCAGATTCCGCCGACCCGACGCCTGCCCGAAATGGGGTT
CACCCTGTACATGGACGATTTCAAACTGGACGACTTACGCCGTTGGTTTGCCTCAAGCGAAGCAAACCTGCCGCCCGAAT
GCGTCCAAGCCGCGCAACTGCTTGATTTCCATGACTTACAAGGCTATTTGAACGGCTTCATCGATATGGTTTGCCAAGAT
TCAGACGGCCATGTCGTTTTAATCGACTACAAATCCAACCATTTAGGCAACGATGCAAGCGCCTACACGCAACAGGCGAT
GAACGAAGCCGTGGCGCATCATCACTACTACCTGCAAGCCCTGATCTACGCCGTTGCCATCGCGCGCTACTACGCCCTGC
GCGGCAAGCCCTTGCCTAAAATCGCCATCCGCTACCTCTTCCTGCGCGGCATGGACGGCTCGGATCGAGGCATCTGGAAA
TGGGACATCGATACCGCCCTGCTTTCCACTTTTGTCGAGCGAAAAACAAATTCTTGA
ATGTCTTCCGCCCTTCCTTTTGACGCGCTCACCCTTTCCATCGACGGCACCAACCTCATCGAAGCCTCCGCCGGTACGGG
TAAAACCTACGGCATTGCCGCGCTCTTTACCCGACTGATTATTTTAGAAAAAAAAGACATCGAGAAAATTCTGGTCGTTA
CCTTTACCAAAGCGGCAACGGCAGAACTGAAAACCCGTTTGCGCGCGCGTTTGGACGAAGTGTTGCAGGTTTTAAACGAA
ATCCAAACCTTGGGCGGCAAGCCGGAACATATTTCAGACGGCCTGAACAAATATTACGAAAAAGAGAAAAAATCCCCCGA
TGACTTTCTCAATCGCTTGATTCCTTTGGCTTTAGGCGAGCAAGACGGACAGGAAAGCTGCCATCGCCTGATTCTCCGCC
TCAAAGCCGCACTGAGCCAGTTTGACAACGCATCGATTTACACCATCCACGGCTTCTGTCAGCGCGTCTTGCGCGATTAC
GCGTTTTTGTGCGGCGCGCCTTTGGATGTCGAGCTGTCGGACGACTCACGCGAGAGGCTGCTGATTCCTGCGCAGGACTT
TTGGCGGCAGAAAGTGGCAACCGATGCCACATTGGCACAATTGGTTTTTGACCGGAAATGCACGCCCGAAGAAATGCTTG
CCGAAATCAAAAGCTATACCGGCCGCCCCTATCTGAAATTCAGACGGCCTGAAGGCGATTTGCAAGAAGCTCAAGCCAAG
CTTCAAGAAACATGGCAAAAAATTTGCGTCCACTTGGAAGACTTGGAAAAAGCGTTTTGGGCAATTTTTCCCAAACTGAA
CGGCCAAACCTACAGAAGAAAAACCTTTGAAAATGTTTTTACTGATCTAAAAACAAACGCCGAATCCAACCGTCTGCCCC
GCCTGAGCAAACAAACGCTGGAAAAATTAAGCCTCTTCAGTATCGACACGCTCAACATCAAACTGAAAAAAGAATATAAA
GCCGATGCCGATGCGCCGGAAATTATTCAGCTGCAAGCCTTGGCTAATCTTGGCCGTAATTTGCAGGCAATGAAAAGCGC
GGAAGAAGCAGTCTTCATCTGCCTGCAACTCGACCTCCTTTCCTACATCAATCAGTCCATTGCTGAACAAAAAAAATCAC
GCCGCGAGCGCGTGTTTGATGATTTGCTGCTGGACGTCCATCAGGCATTGACCACCAATGAACACGGCAACGCATTGGCA
AAAGCGGCAGCGGCAAACTGGGAAATCGCGCTGATTGACGAATTCCAAGATACCGACCCGTTGCAATACGAAATTTTCCG
CCAAATTTTTATCGAACAAAGCTGCCCGCTGTTTCTCGTTGGCGACCCCAAACAGGCGATTTACAGCTTTCGCGGTGCGG
ACATTTACGCCTATCTGCAAGCCGCGCAAGATGCGGACAGGCATTACACTCTCGCCGTCAACTACCGCAGCCATGCCAAG
CTGATCAACGGCATCAGCGCCTTGTTCAAACAAAAAAAACACCCCTTCGTATTGAAAAACATCGATTACAGCGAGGTCTC
CGCCAGCCGTGCCGAAAGCCGGCTGTCGCCACACCGCCCCGCCATCCAAGTGCGCTGGCTCAATACGGACGATCAAACCG
GCAAAGAGATTTTGCGCAGCCGAGCAGCCGAATATTGCGCCGATGAAATTGCCTTTGCGCTCAATGAAGCAGCCGAAGGC
CGTCTGAATTTCAAAGGCCGCGCGTTGGAATCCGGCGACATTGCCGTCTTGGTGCGCACCAACAACGAAGCGGCGATGAT
TGCCAGAAAACTGAAACAGCGCCGTATCCAAAGCGTGTTGCTGTCGCGCCAGTCCGTTTTCGATTCCGCCGAGGCCGACT
CGCTGTCCGCGTTGATCGGCTTTTGGCTCAACCCAAGGCAAACCGACTGGCTGCGCTTTGTCTTGACCGGCGTTTTGTTC
GGCTATACCGCCAAAGAGATTTACGAACTCAACCACAACGAACACCAGCTGCTCAAATGGCTGGAGTCGTCAGCCGAAGC
CTTGGAAAAATGGCGGAAAGGCGGCATTTTTGCCGCCGTGCAGCAGTTTGCCGCCCGACATGACATCGAAACACGCCTGC
TTAAAGGCGGCAACGAACGCAGTCTGACCAATTACTACCAAATTCTGGAGCTTTTGGCCGAAGAAGACAGCCAAAGCCGA
AACCCCGCCGCCCTGCATAAATGGTTAAACGAACAAATCAGCCGTGCGCGCAGCGGCCATTTCCCGTCAGACGCGCAAAC
CATCCGTCTTGAAAGCGACGAAAAATTGGTCAAAATCGTTACCATGCACGCGTCGAAAGGTTTGCAATATCCTTTGGTTT
ACTGCCCCTTCGCATGGGATACCAAAGACAATTCCAAAGAAAACTGGAAAATCCTGCATACTGACAACCACGAAACCGAG
CTGCTGGCGAAATCGCAAACCTCGGAAGCGGAACTAAGCCATCTGGCCGACGAAAAGACGGCGGAAGATTTACGCCTGCT
CTATGTCGCCCTTACCCGCGCCGAAGAACAGCTCAACATCTACGCCGCCGCCAACAAAAACTGTACGCCGAACAATCCTT
TTGCCTATCTGCTCGAAGGCTTGCCAGAGGCCGGCCGCGAAAGCGTCAGCCAAAGCTATCAAAGCACGACAGATGTTGTA
GAAATGCTCAAAACCAACTGGCAACGCTTTATCAAAAACGCGCCCGAAAATACGGAATTCACCTTCACGGAAGAAGCCCC
GCCGGAAACCGTCTATCAATACAGCCACCAACAAGACCAAGCTTTGAGCGCACAGAGCATTAAACGCCGCGATTTTGACT
TTATCCGCCACACCAGCTTTACCGGTTTGAGCAGGCATACCAAGTCAAGCGATGAGCAACACGAGCCTTTGCAACCTGCC
ATCGATCCGGCAGAAAGCGCAGACCGTGCCATGCCGTCTGAAAACCTGCCGCCCCCGCTTTCAGACGGCCTCGATATCCA
CCATTTTCCCCGCGGCACCAATGCCGGCGTATGTTTGCATGAAATACTGGAAAAACTCGACTTTGCCGCCTCTGCCGAGA
GCCAATCCGAAATGATTGCCGAAGTTTTGCAACGCCACAGCTTTGAAGACAAATGGCTGCCGACGGTAAGCGCTATGCTC
GACATCTGCCGCCTGACGCCTTTAATCAACGAGAGCCTGTCGCAGATTCCGCCGACCCGACGCCTGCCCGAAATGGGGTT
CACCCTGTACATGGACGATTTCAAACTGGACGACTTACGCCGTTGGTTTGCCTCAAGCGAAGCAAACCTGCCGCCCGAAT
GCGTCCAAGCCGCGCAACTGCTTGATTTCCATGACTTACAAGGCTATTTGAACGGCTTCATCGATATGGTTTGCCAAGAT
TCAGACGGCCATGTCGTTTTAATCGACTACAAATCCAACCATTTAGGCAACGATGCAAGCGCCTACACGCAACAGGCGAT
GAACGAAGCCGTGGCGCATCATCACTACTACCTGCAAGCCCTGATCTACGCCGTTGCCATCGCGCGCTACTACGCCCTGC
GCGGCAAGCCCTTGCCTAAAATCGCCATCCGCTACCTCTTCCTGCGCGGCATGGACGGCTCGGATCGAGGCATCTGGAAA
TGGGACATCGATACCGCCCTGCTTTCCACTTTTGTCGAGCGAAAAACAAATTCTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recB | Neisseria gonorrhoeae strain FA1090 |
60.729 |
99.097 |
0.602 |