Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   RRU92_RS02935 Genome accession   NZ_CP135436
Coordinates   586832..588592 (+) Length   586 a.a.
NCBI ID   WP_315640349.1    Uniprot ID   A0AA96MSB3
Organism   Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 581832..593592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RRU92_RS02915 (RRU92_02915) - 582833..583549 (+) 717 WP_045762594.1 YebC/PmpR family DNA-binding transcriptional regulator -
  RRU92_RS02920 (RRU92_02920) - 583771..584430 (-) 660 WP_315640346.1 hypothetical protein -
  RRU92_RS02925 (RRU92_02925) - 584628..585089 (+) 462 WP_045613843.1 MarR family winged helix-turn-helix transcriptional regulator -
  RRU92_RS02930 (RRU92_02930) rcrP 585073..586842 (+) 1770 WP_315640347.1 ABC transporter ATP-binding protein Regulator
  RRU92_RS02935 (RRU92_02935) rcrQ 586832..588592 (+) 1761 WP_315640349.1 ABC transporter ATP-binding protein Regulator
  RRU92_RS02940 (RRU92_02940) - 588692..589195 (+) 504 WP_315640351.1 phosphatase PAP2 family protein -
  RRU92_RS02945 (RRU92_02945) - 589314..589760 (+) 447 WP_006155797.1 LytTR family DNA-binding domain-containing protein -
  RRU92_RS02950 (RRU92_02950) - 589765..590439 (+) 675 WP_315640352.1 LiaF transmembrane domain-containing protein -
  RRU92_RS02955 (RRU92_02955) rpmB 590546..590734 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  RRU92_RS02960 (RRU92_02960) - 590885..591250 (+) 366 WP_000216431.1 Asp23/Gls24 family envelope stress response protein -
  RRU92_RS02965 (RRU92_02965) - 591253..592920 (+) 1668 WP_315640355.1 DAK2 domain-containing protein -
  RRU92_RS02970 (RRU92_02970) - 593130..593336 (+) 207 WP_025170070.1 hypothetical protein -
  RRU92_RS02975 (RRU92_02975) - 593333..593527 (+) 195 WP_281335289.1 hypothetical protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64362.05 Da        Isoelectric Point: 5.1171

>NTDB_id=886520 RRU92_RS02935 WP_315640349.1 586832..588592(+) (rcrQ) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
MENKKMSLWKQYKPFLAGLQLPLLVAVVAAVCSSIITVYGPTKIKEITNLISDGLATEIDLVAVSSIASFLAILYVLGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLAYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLITM
FGMNWILALVTVISTLVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTTKETFAGLNQNLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVVIVGAALALEGHISIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVFE
FLGEAEMEDESHKERQLTGMKGDVVFDRVAFGYTPEKTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKAMKRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQTGISDERVIEAAKAVGIHHFITTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEVEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=886520 RRU92_RS02935 WP_315640349.1 586832..588592(+) (rcrQ) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
ATGGAAAATAAGAAAATGTCCTTATGGAAACAATATAAACCTTTTCTAGCAGGTCTCCAACTTCCCCTACTAGTTGCAGT
TGTGGCGGCTGTATGTTCAAGCATCATCACGGTTTATGGACCAACTAAGATTAAGGAAATCACCAACTTGATTTCAGATG
GCTTGGCTACAGAAATCGATTTGGTAGCTGTGTCAAGTATCGCCAGCTTTTTAGCTATTTTGTATGTGCTTGGTGCCATT
CTCAACTATACGCAAGCCTATATCTTTTCAACGAGTATCCAACATTTTTCAAAACGCTTGCGGACAGCTATCGCTGAAAA
AATTAATCGTCTGCCACTTGCTTATTTTGACCGTCATTCTCAAGGAGATACTCTATCTCGTGTAACCAATGACGTCGATA
CGGCGGCTCAGTCCCTCAACCAAAGTCTGGGAACAGTGCTCTCAGCTAGCTTTCTACTGATTGCTGTTTTGATTACCATG
TTTGGCATGAACTGGATTTTGGCATTGGTAACAGTTATTTCAACCCTTGTAGGTTTTGCAGCTGTTTCAGTCATTATGGC
CAAGTCACAGGGTTACTTTAAAGCCCAACAAAATAATTTAGCAGCTGTCAATGGTTATGTGGAAGAAATGTACTCTGGCC
ACAATGTTGTGACCAGCTATAACGCTGTGGACACCACTAAAGAAACATTCGCAGGATTGAATCAAAATCTACATGATAGT
ATCTGGAAATCTCAGTTTATTTCTGGCATCATGATGCCTGCTATGTTCTTTGTCGGAAACTTTAGTTATGTTTTGGTTGT
TATCGTCGGTGCTGCCTTGGCTCTTGAAGGCCATATCAGTATTGGGATTATCGTAGCTTTTATGGTTTATGTTCGAACCT
TCTCGCAACCCTTATCACAGATTGCCCAAGGAATTACCAGCTTGCAACAGGCTAGTGCAGCTATGACACGTGTTTTTGAG
TTTCTAGGAGAAGCTGAGATGGAAGATGAATCTCATAAGGAAAGACAATTGACTGGCATGAAGGGTGATGTGGTCTTTGA
CAGAGTTGCCTTTGGCTATACTCCTGAGAAAACGATCATTCATGATTTTTCTGCGACAGCTCATGCAGGGCAAAAGGTTG
CCATTGTTGGGCCGACTGGAGCGGGTAAGACTACTATTGTCAATCTCTTGATGAAGTTCTATGAGATTGATAAGGGAAGT
ATTCGCATCGATGGTGTGGATACCAAGGCTATGAAGCGCTCAGAAGTGCACGATGCCTTTTCAATGGTCTTGCAGGATAC
CTGGCTCTTTGAAGGAACCATTCGAGACAATCTCATTTATAATCAAACAGGTATCAGTGATGAACGTGTGATTGAAGCTG
CCAAAGCAGTAGGGATCCACCACTTTATCACAACCTTACCTGATGGATACGATACTGTTTTGGATGATACAGTGACCTTG
TCCGTCGGACAGAAACAGCTCTTGACCATCGCTCGTGCCCTTCTCAAGGATGCTCCGCTCTTGATTCTTGATGAAGCGAC
CTCTTCAGTCGATACACGTACAGAGGAGTTGATTCAGAAAGCCATGGACCGTTTGATGGAGGGACGCACATCCTTTGTTA
TTGCCCATCGTTTGTCAACTATTCGTAATGCTGATTTGATTCTTGTCATGAAAGATGGAAATATCATCGAACAAGGAAAT
CATGAGGAGCTTATGGCTCAGGGTGGTTTCTATGCTGATCTCTACAATAGTCAATTTACAGAAGATGAAGTAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(23-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

67.698

99.317

0.672