Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   RRU92_RS02930 Genome accession   NZ_CP135436
Coordinates   585073..586842 (+) Length   589 a.a.
NCBI ID   WP_315640347.1    Uniprot ID   A0AA96MT54
Organism   Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 580073..591842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RRU92_RS02905 (RRU92_02905) - 580702..581256 (-) 555 WP_153224554.1 GNAT family N-acetyltransferase -
  RRU92_RS02910 (RRU92_02910) - 581365..582735 (+) 1371 WP_315640343.1 MATE family efflux transporter -
  RRU92_RS02915 (RRU92_02915) - 582833..583549 (+) 717 WP_045762594.1 YebC/PmpR family DNA-binding transcriptional regulator -
  RRU92_RS02920 (RRU92_02920) - 583771..584430 (-) 660 WP_315640346.1 hypothetical protein -
  RRU92_RS02925 (RRU92_02925) - 584628..585089 (+) 462 WP_045613843.1 MarR family winged helix-turn-helix transcriptional regulator -
  RRU92_RS02930 (RRU92_02930) rcrP 585073..586842 (+) 1770 WP_315640347.1 ABC transporter ATP-binding protein Regulator
  RRU92_RS02935 (RRU92_02935) rcrQ 586832..588592 (+) 1761 WP_315640349.1 ABC transporter ATP-binding protein Regulator
  RRU92_RS02940 (RRU92_02940) - 588692..589195 (+) 504 WP_315640351.1 phosphatase PAP2 family protein -
  RRU92_RS02945 (RRU92_02945) - 589314..589760 (+) 447 WP_006155797.1 LytTR family DNA-binding domain-containing protein -
  RRU92_RS02950 (RRU92_02950) - 589765..590439 (+) 675 WP_315640352.1 LiaF transmembrane domain-containing protein -
  RRU92_RS02955 (RRU92_02955) rpmB 590546..590734 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  RRU92_RS02960 (RRU92_02960) - 590885..591250 (+) 366 WP_000216431.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65475.80 Da        Isoelectric Point: 5.6139

>NTDB_id=886519 RRU92_RS02930 WP_315640347.1 585073..586842(+) (rcrP) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
MKKLAKRITGREWGMIFVTVLFTCCSVYLELEVPTYVSRITELLGTPGTELGDLWSPATKMMGLSLLAFMSSVAVGFFAS
RVAATYTTHLRSDIFNRVLDFSQTEIKRFSIPSLLTRTTNDITQIQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDQKFEEANEEVTRLNLFVSRLMAI
MNPIMQAISSGLILAIYWIGAYLINDASLTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSQPQTAEASVQGQVEFRDVTFRYSKNSEAVVEHVSFKAEAGQTIAFIGSTGSGKSTLVNLLPRFYDVSDGEILV
DGVNVKDYDLEDLRNKVGYIPQKAVLFSGDVKGNLDFGKSQETPLSETAMWQALELAQSKNFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRQVLAEKTQSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=886519 RRU92_RS02930 WP_315640347.1 585073..586842(+) (rcrP) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
ATGAAGAAACTCGCTAAACGTATCACAGGAAGAGAGTGGGGCATGATTTTTGTGACTGTTCTCTTTACCTGTTGCTCGGT
CTATCTAGAGTTAGAAGTACCGACTTACGTTTCAAGAATAACAGAATTGCTTGGAACACCAGGCACAGAGCTAGGAGATC
TTTGGTCCCCAGCAACTAAGATGATGGGCTTATCTCTACTTGCCTTTATGTCGTCGGTAGCGGTTGGATTTTTCGCCTCT
CGTGTTGCAGCAACTTACACAACTCATCTAAGAAGCGATATTTTTAATCGAGTTCTGGATTTTTCACAGACAGAGATTAA
ACGTTTTTCAATCCCCAGTCTTTTGACTCGGACGACCAACGATATCACGCAGATTCAGATGCTTTTTACTATGGGACTCC
AGGTGGTAACACGTGGACCTATCATGGCTATTTGGGCCATCGGTAAAATCCTTGGCAAATCTGAATACTGGCTCTGGGCA
GTAGTAGTGGCTGTTATCGTCAATGTTCTGATGACAACTGTTCTCATGACTCTGGCCTTTCCTAAACAATCTGTCATTCA
AAAATTGACAGATAAACTCAATAGTATCACTCGTGAAAGCTTGACAGGAATTCGGGTTGTTCGTGCTTATAATGCTGAGG
ATTATCAAGATCAGAAATTCGAAGAAGCTAATGAAGAAGTCACGCGACTCAATCTCTTTGTTAGTCGCTTAATGGCCATT
ATGAACCCAATTATGCAGGCGATTTCTAGTGGCTTGATCCTTGCAATTTACTGGATTGGTGCCTATCTTATCAACGATGC
TAGCCTGACAGAACGTCTGCCACTCTTTAGTGATATGGTGGTCTTCATGTCTTATGCCATGCAGGTCGTGATGGGCTTCT
TGCTCATGGGTGCTCTCTTTATCGTCCTTCCTCGTACCTTGGTTTCTGCAGGACGTATCAATCAAGTGCTGGACTTGCAT
TCTTCTATTGAAAATCCTAGTCAACCACAGACTGCAGAAGCATCTGTTCAAGGTCAAGTGGAATTCCGTGATGTAACCTT
CCGTTACTCTAAAAACTCAGAAGCGGTTGTGGAGCATGTCAGTTTCAAGGCAGAAGCAGGACAAACCATTGCCTTTATCG
GCTCAACTGGTTCTGGTAAATCTACGCTTGTGAACCTCTTGCCTCGTTTTTATGATGTATCTGATGGGGAAATCCTAGTG
GACGGTGTCAATGTGAAAGATTACGACTTGGAAGATTTGCGTAATAAAGTCGGCTATATCCCACAAAAAGCAGTCCTCTT
CTCAGGAGATGTCAAGGGCAATCTCGACTTTGGTAAGAGTCAAGAAACGCCACTAAGTGAGACTGCCATGTGGCAAGCTT
TGGAATTGGCCCAGTCTAAAAACTTTATCGAAGATAAGGAAGCAGGTCTAGCTTCAGAAGTGGCTCAAGGTGGGACTAAC
TTCTCAGGAGGTCAAAGACAACGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAGCCAGAGATTCTCATTTTTGACGATTC
ATTCTCAGCCTTGGACTACAAGACAGACCGTATCTTGCGCCAAGTATTAGCTGAAAAGACACAATCCATGACCAAGTTGA
TCGTTGCCCAACGCATTTCAACCATCATGGACGCTGACCTGATCTTAGTCTTGGATCAGGGGAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTTGCAACTAACGAAGTTTATCAAGAAATTGCCTATTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(30-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

65.225

100

0.666