Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   RRV45_RS08370 Genome accession   NZ_CP135435
Coordinates   1688910..1689380 (-) Length   156 a.a.
NCBI ID   WP_315668358.1    Uniprot ID   A0AA96MWK4
Organism   Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1683910..1694380
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RRV45_RS08330 (RRV45_08330) - 1684014..1684211 (+) 198 WP_410489344.1 hypothetical protein -
  RRV45_RS08335 (RRV45_08335) - 1684379..1684756 (+) 378 WP_315668351.1 cytochrome-c oxidase -
  RRV45_RS08340 (RRV45_08340) - 1684881..1685105 (+) 225 WP_315668352.1 hypothetical protein -
  RRV45_RS08345 (RRV45_08345) - 1685242..1685706 (+) 465 WP_315668353.1 hypothetical protein -
  RRV45_RS08350 (RRV45_08350) - 1685966..1686844 (+) 879 WP_315668354.1 NAD(P)-dependent oxidoreductase -
  RRV45_RS08355 (RRV45_08355) - 1686907..1687083 (+) 177 WP_315668355.1 hypothetical protein -
  RRV45_RS08360 (RRV45_08360) - 1687254..1687778 (+) 525 WP_315668356.1 RDD family protein -
  RRV45_RS08365 (RRV45_08365) - 1687952..1688857 (+) 906 WP_315668357.1 chemotaxis protein -
  RRV45_RS08370 (RRV45_08370) kre 1688910..1689380 (-) 471 WP_315668358.1 YkyB family protein Regulator
  RRV45_RS08375 (RRV45_08375) - 1689957..1692065 (+) 2109 WP_315668359.1 EAL domain-containing protein -
  RRV45_RS08380 (RRV45_08380) - 1692097..1692963 (-) 867 WP_315668360.1 metallophosphoesterase -
  RRV45_RS08385 (RRV45_08385) fadH 1693169..1693933 (+) 765 WP_315668361.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17756.22 Da        Isoelectric Point: 10.3922

>NTDB_id=886469 RRV45_RS08370 WP_315668358.1 1688910..1689380(-) (kre) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
MNSEKNDNPHYLHPTVENLSQAIFTVNRHAKTATNPKFLYKLKQDALQKLIREGKANKVGLHFSGNPKYSQQQSDVLVEC
GNYSFHLPPSKADFAQLPHLGKLNDHIRNPRSTLSLNQAKKLLISYTGLKEANDPPSHKKRSYNKPVFKKLGESYF

Nucleotide


Download         Length: 471 bp        

>NTDB_id=886469 RRV45_RS08370 WP_315668358.1 1688910..1689380(-) (kre) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
TTGAACTCGGAAAAGAACGACAATCCTCATTATTTACATCCAACGGTTGAAAACCTCTCACAAGCAATCTTCACCGTTAA
TCGCCATGCAAAGACAGCAACGAACCCAAAGTTCCTATATAAGCTGAAACAGGATGCATTACAAAAGCTTATTAGAGAAG
GTAAAGCCAATAAGGTGGGACTTCATTTCTCAGGTAATCCTAAATACAGTCAGCAGCAATCAGATGTACTTGTTGAGTGT
GGAAATTATTCATTTCATTTACCGCCATCCAAAGCAGATTTCGCCCAACTGCCTCATTTAGGAAAATTAAATGACCATAT
TCGCAACCCAAGATCCACTCTCTCCTTAAACCAAGCGAAAAAACTTCTAATATCTTATACAGGACTTAAGGAAGCAAATG
ATCCACCATCACATAAAAAACGGTCATATAATAAACCCGTATTTAAAAAGCTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.448

92.949

0.59