Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACK2UZ_RS14795 Genome accession   NZ_CP135276
Coordinates   2976416..2977042 (-) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain OHT403-4     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2971416..2982042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2UZ_RS14780 (RRJ53_14770) helD 2971655..2973709 (-) 2055 WP_315433171.1 DNA helicase IV -
  ACK2UZ_RS14785 (RRJ53_14775) - 2973832..2974278 (+) 447 WP_003858149.1 YccF domain-containing protein -
  ACK2UZ_RS14790 (RRJ53_14780) yccS 2974297..2976459 (+) 2163 WP_040117460.1 YccS family putative transporter -
  ACK2UZ_RS14795 (RRJ53_14785) sxy/tfoX 2976416..2977042 (-) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  ACK2UZ_RS14800 (RRJ53_14790) sulA 2977260..2977769 (+) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  ACK2UZ_RS14805 (RRJ53_14795) ompA 2978126..2979178 (+) 1053 WP_017694761.1 porin OmpA -
  ACK2UZ_RS14810 (RRJ53_14800) matP 2979244..2979696 (-) 453 WP_006809347.1 macrodomain Ter protein MatP -
  ACK2UZ_RS14815 (RRJ53_14805) - 2979883..2981643 (+) 1761 WP_017384808.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=886379 ACK2UZ_RS14795 WP_017384804.1 2976416..2977042(-) (sxy/tfoX) [Enterobacter hormaechei strain OHT403-4]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=886379 ACK2UZ_RS14795 WP_017384804.1 2976416..2977042(-) (sxy/tfoX) [Enterobacter hormaechei strain OHT403-4]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572