Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   RP424_RS13725 Genome accession   NZ_CP135270
Coordinates   2840025..2840651 (-) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain IMT49658-1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2835025..2845651
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RP424_RS13710 helD 2835264..2837318 (-) 2055 WP_315450626.1 DNA helicase IV -
  RP424_RS13715 - 2837441..2837887 (+) 447 WP_003858149.1 YccF domain-containing protein -
  RP424_RS13720 yccS 2837906..2840068 (+) 2163 WP_022650744.1 YccS family putative transporter -
  RP424_RS13725 sxy/tfoX 2840025..2840651 (-) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  RP424_RS13730 sulA 2840869..2841378 (+) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  RP424_RS13735 ompA 2841735..2842787 (+) 1053 WP_003858156.1 porin OmpA -
  RP424_RS13740 matP 2842853..2843305 (-) 453 WP_003858158.1 macrodomain Ter protein MatP -
  RP424_RS13745 - 2843492..2845252 (+) 1761 WP_032657964.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=886356 RP424_RS13725 WP_023315767.1 2840025..2840651(-) (sxy/tfoX) [Enterobacter hormaechei strain IMT49658-1]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=886356 RP424_RS13725 WP_023315767.1 2840025..2840651(-) (sxy/tfoX) [Enterobacter hormaechei strain IMT49658-1]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572