Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   RQP59_RS08050 Genome accession   NZ_CP135253
Coordinates   1698961..1699587 (+) Length   208 a.a.
NCBI ID   WP_265194165.1    Uniprot ID   A0AA96MC03
Organism   Enterobacter chuandaensis strain FAHZZU5885     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1693961..1704587
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RQP59_RS08030 (RQP59_08010) - 1694361..1696121 (-) 1761 WP_218728831.1 Lon protease family protein -
  RQP59_RS08035 (RQP59_08015) matP 1696308..1696760 (+) 453 WP_023332611.1 macrodomain Ter protein MatP -
  RQP59_RS08040 (RQP59_08020) ompA 1696824..1697879 (-) 1056 WP_322921789.1 porin OmpA -
  RQP59_RS08045 (RQP59_08025) sulA 1698234..1698743 (-) 510 WP_080327670.1 SOS-induced cell division inhibitor SulA -
  RQP59_RS08050 (RQP59_08030) sxy/tfoX 1698961..1699587 (+) 627 WP_265194165.1 TfoX/Sxy family DNA transformation protein Regulator
  RQP59_RS08055 (RQP59_08035) yccS 1699544..1701706 (-) 2163 WP_265194164.1 YccS family putative transporter -
  RQP59_RS08060 (RQP59_08040) - 1701726..1702172 (-) 447 WP_023335159.1 YccF domain-containing protein -
  RQP59_RS08065 (RQP59_08045) helD 1702296..1704350 (+) 2055 WP_265194163.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23979.52 Da        Isoelectric Point: 9.2151

>NTDB_id=886300 RQP59_RS08050 WP_265194165.1 1698961..1699587(+) (sxy/tfoX) [Enterobacter chuandaensis strain FAHZZU5885]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRVCEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLKLSSFALNAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARESWLKMRAKN
NALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPESQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=886300 RQP59_RS08050 WP_265194165.1 1698961..1699587(+) (sxy/tfoX) [Enterobacter chuandaensis strain FAHZZU5885]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCGCCGTTGGGTGAAATTCACCATCGCGCGCT
GTTCGGCGGCTATACCCTGGCAGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGTGAGCTCTACCTCCGCGTCTGTG
AAGAAAGCGCGAAATACTGTGTCAAAAATGCTGCCTCTTTTTTGACGCTAATGAAGCGGGGACGTCCGGTGCTTCTCAAC
TACTATCGCGTGGATGATGGGCTGTGGCAGGACAGGGAGCGTCTGCTTAAGCTCTCCTCATTTGCGCTCAATGCGGCAAG
GAAAGAGCGTTATCAGCGGCATCAGCGAAACCGCCTTAAAGATCTGCCAAACCTGACTTTTCAGCTGGAAGTGTTGCTCT
TCGAAGCAGGTATTACTAACGAAGAGACGCTGCGGGCGCTAGGGGCCAGGGAGAGCTGGCTGAAGATGCGGGCAAAAAAT
AATGCGCTCAGTATTAAAGTGCTCTTCGCGCTGGAAGGAGCCATTGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGTAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGTCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.635

97.596

0.562