Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RP314_RS14755 Genome accession   NZ_CP135199
Coordinates   2957463..2957654 (-) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain CMML21-47     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2952463..2962654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RP314_RS14730 (RP314_14730) - 2952819..2953805 (-) 987 WP_029325950.1 ABC transporter ATP-binding protein -
  RP314_RS14735 (RP314_14735) - 2953979..2954764 (-) 786 WP_077722052.1 DUF2268 domain-containing protein -
  RP314_RS14740 (RP314_14740) fabF 2954848..2956086 (-) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  RP314_RS14745 (RP314_14745) - 2956109..2957047 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  RP314_RS14750 (RP314_14750) - 2957215..2957433 (+) 219 WP_003155059.1 hypothetical protein -
  RP314_RS14755 (RP314_14755) comZ 2957463..2957654 (-) 192 WP_003155061.1 ComZ family protein Regulator
  RP314_RS14760 (RP314_14760) med 2957667..2958620 (-) 954 WP_070081621.1 BMP family ABC transporter substrate-binding protein Regulator
  RP314_RS14765 (RP314_14765) - 2958710..2959276 (-) 567 WP_077722051.1 hypothetical protein -
  RP314_RS14770 (RP314_14770) - 2959359..2960093 (-) 735 WP_077722050.1 hypothetical protein -
  RP314_RS14775 (RP314_14775) - 2960354..2960539 (+) 186 WP_032874447.1 YjzD family protein -
  RP314_RS14780 (RP314_14780) - 2960576..2960755 (-) 180 WP_003155070.1 YjzC family protein -
  RP314_RS14785 (RP314_14785) argF 2960831..2961802 (-) 972 WP_071391999.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=886225 RP314_RS14755 WP_003155061.1 2957463..2957654(-) (comZ) [Bacillus velezensis strain CMML21-47]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=886225 RP314_RS14755 WP_003155061.1 2957463..2957654(-) (comZ) [Bacillus velezensis strain CMML21-47]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794