Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   RJD11_RS01800 Genome accession   NZ_CP135184
Coordinates   346491..346655 (+) Length   54 a.a.
NCBI ID   WP_269461319.1    Uniprot ID   -
Organism   Bacillus velezensis strain NDB     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 341491..351655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RJD11_RS21480 - 343956..344246 (+) 291 WP_352427002.1 hypothetical protein -
  RJD11_RS01795 (RJD11_01795) - 344324..346474 (+) 2151 Protein_314 amino acid adenylation domain-containing protein -
  RJD11_RS01800 (RJD11_01800) comS 346491..346655 (+) 165 WP_269461319.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6184.17 Da        Isoelectric Point: 12.0559

>NTDB_id=886013 RJD11_RS01800 WP_269461319.1 346491..346655(+) (comS) [Bacillus velezensis strain NDB]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRQARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=886013 RJD11_RS01800 WP_269461319.1 346491..346655(+) (comS) [Bacillus velezensis strain NDB]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCAAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

63.636

81.481

0.519