Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   RQL82_RS02375 Genome accession   NZ_CP135159
Coordinates   484490..485374 (+) Length   294 a.a.
NCBI ID   WP_284090595.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AR3651     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 479490..490374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RQL82_RS02350 (RQL82_02355) - 479804..481051 (-) 1248 WP_002119535.1 YihY family inner membrane protein -
  RQL82_RS02355 (RQL82_02360) wrbA 481412..482014 (+) 603 WP_119686063.1 NAD(P)H:quinone oxidoreductase -
  RQL82_RS02360 (RQL82_02365) xpt 482066..482641 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  RQL82_RS02365 (RQL82_02370) - 482714..483427 (-) 714 WP_002119525.1 DUF3108 domain-containing protein -
  RQL82_RS02370 (RQL82_02375) - 483586..484257 (-) 672 WP_014207723.1 hypothetical protein -
  RQL82_RS02375 (RQL82_02380) tonB2 484490..485374 (+) 885 WP_284090595.1 energy transducer TonB Machinery gene
  RQL82_RS02380 (RQL82_02385) ybeY 485426..485902 (-) 477 WP_002119528.1 rRNA maturation RNase YbeY -
  RQL82_RS02385 (RQL82_02390) phoL 485912..487000 (-) 1089 WP_002119513.1 PhoH family protein -
  RQL82_RS02390 (RQL82_02395) miaB 487038..488489 (-) 1452 WP_002119558.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33636.20 Da        Isoelectric Point: 7.2965

>NTDB_id=885733 RQL82_RS02375 WP_284090595.1 484490..485374(+) (tonB2) [Acinetobacter pittii strain AR3651]
MLNKRSLSIEPFHHWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVHQADFLAQADQQGSGA
FREAHRTSSDTPNPMLNDASTGDTELESLQKIQQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFREKVELYGNRYYPEEAKHQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=885733 RQL82_RS02375 WP_284090595.1 484490..485374(+) (tonB2) [Acinetobacter pittii strain AR3651]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATCATTGGTGGCAAGACCGGGTCTTTATTGCTGCAACAATATT
GGCAATCTTACTGCATATTTTTGTATTGCTCATTCACTTTGCTATGCCTAGCCCCTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTCATCAGGCAGATTTTTTAGCGCAAGCAGATCAGCAAGGCTCGGGCGCA
TTTCGTGAAGCTCATCGGACTTCTAGTGATACTCCAAATCCGATGCTCAATGATGCTTCAACTGGAGATACTGAGTTAGA
AAGTTTGCAAAAGATACAGCAACAAAGAGAGCTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAATTACAAAGTCAATTTCAAGCAAAAGCTGCGATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAAATCAAAACAGTAGATGGTATTCAAGCAAA
GAAAGATGCTTCAGCTATTTATTTAGATAAATTTCGTGAAAAAGTAGAGCTTTACGGTAATCGCTATTACCCTGAAGAAG
CCAAACACCAGCAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGCTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCCAATATGAAAGATATTTCGGAGTTGCGTATAGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

89.116

100

0.891