Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RO838_RS04810 Genome accession   NZ_CP135134
Coordinates   1110027..1110443 (+) Length   138 a.a.
NCBI ID   WP_004085459.1    Uniprot ID   A0A060H0R7
Organism   Xylella fastidiosa strain CFBP8478     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1105027..1115443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RO838_RS04790 (RO838_04790) - 1106864..1107205 (-) 342 WP_316666226.1 DUF6216 family protein -
  RO838_RS04795 (RO838_04795) - 1107141..1107641 (-) 501 WP_268802419.1 DUF6216 family protein -
  RO838_RS04800 (RO838_04800) - 1107950..1108825 (-) 876 WP_128734993.1 energy transducer TonB -
  RO838_RS04805 (RO838_04805) gshB 1108827..1109771 (-) 945 WP_057682643.1 glutathione synthase -
  RO838_RS04810 (RO838_04810) pilG 1110027..1110443 (+) 417 WP_004085459.1 response regulator Regulator
  RO838_RS04815 (RO838_04815) - 1110460..1110990 (+) 531 WP_004085458.1 chemotaxis protein CheW -
  RO838_RS04820 (RO838_04820) - 1111030..1113072 (+) 2043 WP_057682644.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15325.02 Da        Isoelectric Point: 9.7976

>NTDB_id=885516 RO838_RS04810 WP_004085459.1 1110027..1110443(+) (pilG) [Xylella fastidiosa strain CFBP8478]
MIKSVASGKELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQKSQIIFVDIMMPRLDGYQTCALIK
NNNLFKSTPVIMLSSKDGLFDKARGRVVGSEQYLTKPFTREELLSAIRTYVNPLKLAV

Nucleotide


Download         Length: 417 bp        

>NTDB_id=885516 RO838_RS04810 WP_004085459.1 1110027..1110443(+) (pilG) [Xylella fastidiosa strain CFBP8478]
ATGATTAAAAGTGTTGCTAGCGGCAAGGAACTCGCAGGTCTTAGGGTGATGGTCATTGATGACTCAAAAACCATAAGACG
TACCGCTGAAACGCTTCTTAAGCGTGAAGGGTGTGAGGTGGTTACCGCTATTGATGGCTTTGAAGCCTTAGCGAAAATTG
CTGATCAGAAGTCGCAGATTATTTTTGTCGATATTATGATGCCGCGCTTGGATGGTTATCAAACTTGCGCGTTGATAAAA
AACAATAACTTGTTTAAGTCGACTCCAGTGATCATGCTTTCTTCTAAAGATGGCTTATTCGATAAGGCGCGCGGTCGTGT
GGTTGGTTCCGAACAATATCTGACCAAACCTTTTACACGCGAGGAGTTGTTAAGTGCCATCCGTACATATGTTAATCCTT
TAAAATTAGCTGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060H0R7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.77

88.406

0.652