Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RO839_RS04800 Genome accession   NZ_CP135132
Coordinates   1109887..1110303 (+) Length   138 a.a.
NCBI ID   WP_004085459.1    Uniprot ID   A0A060H0R7
Organism   Xylella fastidiosa strain CO33     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1104887..1115303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RO839_RS04780 (RO839_04780) - 1106724..1107065 (-) 342 WP_316666226.1 DUF6216 family protein -
  RO839_RS04785 (RO839_04785) - 1107001..1107501 (-) 501 WP_268802419.1 DUF6216 family protein -
  RO839_RS04790 (RO839_04790) - 1107810..1108685 (-) 876 WP_128734993.1 energy transducer TonB -
  RO839_RS04795 (RO839_04795) gshB 1108687..1109631 (-) 945 WP_057682643.1 glutathione synthase -
  RO839_RS04800 (RO839_04800) pilG 1109887..1110303 (+) 417 WP_004085459.1 response regulator Regulator
  RO839_RS04805 (RO839_04805) - 1110320..1110850 (+) 531 WP_004085458.1 chemotaxis protein CheW -
  RO839_RS04810 (RO839_04810) - 1110890..1112932 (+) 2043 WP_057682644.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15325.02 Da        Isoelectric Point: 9.7976

>NTDB_id=885497 RO839_RS04800 WP_004085459.1 1109887..1110303(+) (pilG) [Xylella fastidiosa strain CO33]
MIKSVASGKELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQKSQIIFVDIMMPRLDGYQTCALIK
NNNLFKSTPVIMLSSKDGLFDKARGRVVGSEQYLTKPFTREELLSAIRTYVNPLKLAV

Nucleotide


Download         Length: 417 bp        

>NTDB_id=885497 RO839_RS04800 WP_004085459.1 1109887..1110303(+) (pilG) [Xylella fastidiosa strain CO33]
ATGATTAAAAGTGTTGCTAGCGGCAAGGAACTCGCAGGTCTTAGGGTGATGGTCATTGATGACTCAAAAACCATAAGACG
TACCGCTGAAACGCTTCTTAAGCGTGAAGGGTGTGAGGTGGTTACCGCTATTGATGGCTTTGAAGCCTTAGCGAAAATTG
CTGATCAGAAGTCGCAGATTATTTTTGTCGATATTATGATGCCGCGCTTGGATGGTTATCAAACTTGCGCGTTGATAAAA
AACAATAACTTGTTTAAGTCGACTCCAGTGATCATGCTTTCTTCTAAAGATGGCTTATTCGATAAGGCGCGCGGTCGTGT
GGTTGGTTCCGAACAATATCTGACCAAACCTTTTACACGCGAGGAGTTGTTAAGTGCCATCCGTACATATGTTAATCCTT
TAAAATTAGCTGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060H0R7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.77

88.406

0.652