Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   QN328_RS09995 Genome accession   NZ_CP135102
Coordinates   1979164..1979937 (+) Length   257 a.a.
NCBI ID   WP_000456087.1    Uniprot ID   A0AAW3HS18
Organism   Streptococcus agalactiae strain HU32/21     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1974164..1984937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN328_RS09985 (QN328_09965) rlmH 1977157..1977636 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QN328_RS09990 (QN328_09970) htrA 1977837..1979066 (+) 1230 WP_000728358.1 S1C family serine protease Regulator
  QN328_RS09995 (QN328_09975) spo0J 1979164..1979937 (+) 774 WP_000456087.1 ParB/RepB/Spo0J family partition protein Regulator
  QN328_RS10000 (QN328_09980) dnaA 1980136..1981497 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  QN328_RS10005 (QN328_09985) dnaN 1981652..1982788 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  QN328_RS10010 (QN328_09990) - 1982846..1983739 (+) 894 WP_000987446.1 diacylglycerol/lipid kinase family protein -
  QN328_RS10015 (QN328_09995) - 1983749..1983946 (+) 198 WP_000285199.1 DUF951 domain-containing protein -
  QN328_RS10020 (QN328_10000) - 1984094..1984156 (+) 63 Protein_1933 DNA-binding protein -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29238.73 Da        Isoelectric Point: 9.9193

>NTDB_id=885348 QN328_RS09995 WP_000456087.1 1979164..1979937(+) (spo0J) [Streptococcus agalactiae strain HU32/21]
MEYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=885348 QN328_RS09995 WP_000456087.1 1979164..1979937(+) (spo0J) [Streptococcus agalactiae strain HU32/21]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCAACTCTATTAAAATTAATGGCCTTATCCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572