Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   OCUAc17_RS17160 Genome accession   NZ_AP024798
Coordinates   3600223..3602451 (+) Length   742 a.a.
NCBI ID   WP_005804166.1    Uniprot ID   A0A009MQ98
Organism   Acinetobacter pittii strain OCU Ac17     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3595223..3607451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCUAc17_RS17135 (OCUAc17_33480) lnt 3595605..3597164 (+) 1560 WP_002114914.1 apolipoprotein N-acyltransferase -
  OCUAc17_RS17140 (OCUAc17_33490) csaA 3597166..3597504 (-) 339 WP_005804172.1 tRNA-binding protein -
  OCUAc17_RS17145 (OCUAc17_33500) - 3597649..3597993 (-) 345 WP_005804170.1 hypothetical protein -
  OCUAc17_RS17150 (OCUAc17_33510) gspG 3598261..3598845 (-) 585 WP_025464144.1 type II secretion system major pseudopilin GspG -
  OCUAc17_RS17155 (OCUAc17_33520) gspF 3598869..3600074 (-) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  OCUAc17_RS17160 (OCUAc17_33530) priA 3600223..3602451 (+) 2229 WP_005804166.1 primosomal protein N' Machinery gene
  OCUAc17_RS17165 (OCUAc17_33540) kefB 3602528..3604372 (+) 1845 WP_002114812.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  OCUAc17_RS17170 (OCUAc17_33550) hslO 3604535..3605410 (+) 876 WP_002114728.1 Hsp33 family molecular chaperone HslO -
  OCUAc17_RS17175 (OCUAc17_33560) - 3605548..3606159 (+) 612 WP_002115157.1 LysE family translocator -
  OCUAc17_RS17180 (OCUAc17_33570) cbpA 3606306..3607262 (+) 957 WP_005804162.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 83969.73 Da        Isoelectric Point: 8.4588

>NTDB_id=88519 OCUAc17_RS17160 WP_005804166.1 3600223..3602451(+) (priA) [Acinetobacter pittii strain OCU Ac17]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DDEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVELAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQSCPVILGSATPSIDSYYLVETGKLTALQLNKRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGEIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=88519 OCUAc17_RS17160 WP_005804166.1 3600223..3602451(+) (priA) [Acinetobacter pittii strain OCU Ac17]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCACGTAGGCTCACGCGTCGCTATTTCATTTGGACGCCAAAATCTGA
TTGGCATCATTACTGAAAAAGTTGACCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GACGATGAGCCTATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCAGCCCAGTATTACCAATTTCCAATTGGCGA
GGTCATGCAAACCGCCCTACCCGCATTATTGCGTCAGGGCAAACCAATGGATGTTTTGTTCCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGCTCTGTTAAGCAACAAGACGCGTATCAAATTTTAAAATTACACCCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCGCACGACTTTAGCCCATCGCCTGTTGAATTGGCACAAATGCCGCTCACGCTAAATGAAGACCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTTTTATTAGATGGTTTAACAGGAAGCGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTCCCTGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAATCACGTTTTAACTGTGATATTGCTCTATTACACTCGGGCTTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCCCAGACTGGCAAAGCATCTATTATTTTAGGAACCCGCTCAGCCATCTATACGCCA
CTGCCACGTTTGGGCCTCATCATCTTAGATGAAGAACATGATCTGTCTTATAAGCAACAAGAAGGCTTCCGCTACCATGC
GCGTGATGTCGCTCTTTATCGAGGTCACTTACAAAGCTGCCCTGTTATTTTAGGTTCAGCAACTCCAAGCATAGATAGTT
ATTATTTAGTCGAAACTGGCAAATTAACTGCACTGCAACTCAACAAACGTGCTGGACATGCACTTTTGCCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCTTTAATCGAACAGATTAAAAATACCCTAGCCAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTCTGTGAAAGTTGTGGATGGCAAGCAA
ATTGTCCGCATTGTGATGCCCATTTTACTTTACATACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGCACTGTT
CATCGCTTGCCAGACCATTGCCCTGAATGCCAGCAAAAAAGCTTAAAAACCCTAGGAGCAGGGACAGCCAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGACTATGATGTGATTCGGGTTGACCGTGACAGTACCAGTCGTGTCGGTAGCTGGCAAA
AAATTTATGACCGTATTCATCAAAACAAACCAACAATTTTACTCGGCACTCAAATGTTGGCAAAAGGTCATCATTTCCCA
CACGTAACTTTGGTTGCTATTTTAGACATTGATGCTGGGTTACTGAGTGTCGATATTCGTGCGCCAGAGCGTACTGCGCA
ATTAATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGTGAACACAAAGGCCATGTTTATTTACAGACCTTAAGACCAGATC
ACCCTTTACTAACCACACTCATCGAAAAAGATTATCGGGCGGTTGCTAAACAGACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCACCTTATCGTTATGCAGTACTGATACGTGCAGAATCTAAAGATCGTGACTATACCTTACATTTTTTAAATGAAGC
GGCGGAACAATTACGCCAAATTGCAGGTGAAATTGTTGATATTTGGGGTCCGATTCCAGCACCGATGGAACGTAAAGCTG
GGCGCTACCGCGCCCACATGGTGATTTTATCTGCTGACCGTGCTCGCCTACATTTTTACTTAAGACAATGGTGGTCACAA
TTGGTTCATGCACCACGGCAGCATCAACTTAGGCTATCAATTGATGTTGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009MQ98

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.978

100

0.98

Multiple sequence alignment