Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RPB93_RS21020 Genome accession   NZ_CP135060
Coordinates   4124035..4124211 (-) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain B126_1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4119035..4129211
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RPB93_RS21000 (RPB93_21000) - 4119507..4120253 (-) 747 WP_000966127.1 YjbA family protein -
  RPB93_RS21005 (RPB93_21005) - 4120397..4121185 (-) 789 WP_000513278.1 DUF2268 domain-containing protein -
  RPB93_RS21010 (RPB93_21010) fabF 4121292..4122530 (-) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  RPB93_RS21015 (RPB93_21015) fabH 4122562..4123494 (-) 933 WP_001100545.1 beta-ketoacyl-ACP synthase III -
  RPB93_RS21020 (RPB93_21020) comZ 4124035..4124211 (-) 177 WP_001986215.1 ComZ family protein Regulator
  RPB93_RS21025 (RPB93_21025) - 4124266..4125138 (-) 873 WP_006921015.1 NAD(P)-dependent oxidoreductase -
  RPB93_RS21030 (RPB93_21030) - 4125168..4125902 (-) 735 WP_000028691.1 hydrolase -
  RPB93_RS21035 (RPB93_21035) - 4126059..4126241 (+) 183 WP_001211116.1 YjzD family protein -
  RPB93_RS21040 (RPB93_21040) clpC 4126280..4128880 (-) 2601 WP_016122101.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=884637 RPB93_RS21020 WP_001986215.1 4124035..4124211(-) (comZ) [Bacillus cereus strain B126_1]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=884637 RPB93_RS21020 WP_001986215.1 4124035..4124211(-) (comZ) [Bacillus cereus strain B126_1]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTACGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586