Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   RPB93_RS20935 Genome accession   NZ_CP135060
Coordinates   4104933..4105616 (-) Length   227 a.a.
NCBI ID   WP_000350713.1    Uniprot ID   A0A9W5RA28
Organism   Bacillus cereus strain B126_1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 4099933..4110616
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RPB93_RS20920 (RPB93_20920) pepF 4100113..4101939 (-) 1827 WP_000003348.1 oligoendopeptidase F Regulator
  RPB93_RS20925 (RPB93_20925) - 4101991..4103235 (-) 1245 WP_000628315.1 competence protein CoiA -
  RPB93_RS20930 (RPB93_20930) - 4103316..4104860 (-) 1545 WP_000799194.1 cardiolipin synthase -
  RPB93_RS20935 (RPB93_20935) mecA 4104933..4105616 (-) 684 WP_000350713.1 adaptor protein MecA Regulator
  RPB93_RS20940 (RPB93_20940) - 4105962..4106636 (+) 675 WP_000362607.1 TerC family protein -
  RPB93_RS20945 (RPB93_20945) spx 4106686..4107081 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  RPB93_RS20950 (RPB93_20950) - 4107675..4107878 (+) 204 WP_000559972.1 hypothetical protein -
  RPB93_RS20955 (RPB93_20955) - 4107909..4109555 (-) 1647 WP_000728609.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 27010.06 Da        Isoelectric Point: 3.9822

>NTDB_id=884634 RPB93_RS20935 WP_000350713.1 4104933..4105616(-) (mecA) [Bacillus cereus strain B126_1]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=884634 RPB93_RS20935 WP_000350713.1 4104933..4105616(-) (mecA) [Bacillus cereus strain B126_1]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559