Detailed information NTG0884397

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ViNHUV68_RS13420
• Genome accession: NZ_CP134975
• Coordinates: 2927569..2928576 (-)
• Length: 335 a.a.
• NCBI ID: WP_038175950.1
• Uniprot ID: -
• Organism: Vibrio sp. NH-UV-68
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2922569..2933576

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ViNHUV68_RS13390 (ViNHUV68_26990)	-	2923254..2924012 (+)	759	WP_038175942.1	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	-
ViNHUV68_RS13395 (ViNHUV68_27000)	frdC	2924015..2924398 (+)	384	WP_038175943.1	fumarate reductase subunit FrdC	-
ViNHUV68_RS13400 (ViNHUV68_27010)	frdD	2924411..2924788 (+)	378	WP_038175944.1	fumarate reductase subunit FrdD	-
ViNHUV68_RS13405 (ViNHUV68_27020)	hslU	2924856..2926190 (-)	1335	WP_038175947.1	HslU--HslV peptidase ATPase subunit	-
ViNHUV68_RS13410 (ViNHUV68_27030)	hslV	2926230..2926772 (-)	543	WP_038175948.1	ATP-dependent protease subunit HslV	-
ViNHUV68_RS13415 (ViNHUV68_27040)	-	2926902..2927450 (-)	549	WP_038175949.1	SPOR domain-containing protein	-
ViNHUV68_RS13420 (ViNHUV68_27050)	cytR	2927569..2928576 (-)	1008	WP_038175950.1	DNA-binding transcriptional regulator CytR	Regulator
ViNHUV68_RS13425 (ViNHUV68_27060)	priA	2928931..2931132 (-)	2202	WP_038175952.1	primosomal protein N'	-
ViNHUV68_RS13430 (ViNHUV68_27070)	rpmE	2931412..2931630 (+)	219	WP_038175954.1	50S ribosomal protein L31	-
ViNHUV68_RS13435 (ViNHUV68_27080)	-	2931889..2933166 (+)	1278	WP_038175956.1	malic enzyme-like NAD(P)-binding protein	-
ViNHUV68_RS13440 (ViNHUV68_27090)	metJ	2933259..2933576 (-)	318	WP_038175957.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36897.58 Da
• Isoelectric Point: 6.3882

>NTDB_id=884397 ViNHUV68_RS13420 WP_038175950.1 2927569..2928576(-) (cytR) [Vibrio sp. NH-UV-68]
MATMKDVAQLAGVSTATVSRALMNPEKVSSATRKRVEDAVLEAGYSPNSLARNLRRNESKTIIAIIPDICDPYYTEIIRG
IEDAAMEHGYIVLLGDSGLQKRRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEYAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRIAEISGPESAALCHFRHQGYQQALRRAGLTMNPAYRAFGDFTFEAGALAVRQLLALPEPPTA
IFCHNDAMAIGAIQQAKKLGLRVPQDLSLVGFDDIQFAQFCDPPLTTISQPRYEIGRQAMLMMLEILRGHDVRAGSRLLE
TTLVIRESAAPPRVL

Nucleotide

• Length: 1008 bp

>NTDB_id=884397 ViNHUV68_RS13420 WP_038175950.1 2927569..2928576(-) (cytR) [Vibrio sp. NH-UV-68]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTTTCAACAGCGACGGTTTCTCGAGCGCTAATGAATCCGGAAAA
AGTATCATCAGCGACGAGAAAACGAGTAGAAGACGCTGTTTTAGAAGCTGGATATTCACCAAATTCGTTGGCACGTAATC
TACGCCGCAACGAATCAAAAACGATCATCGCGATCATTCCTGACATCTGCGATCCTTACTACACTGAAATTATTCGTGGC
ATTGAAGATGCCGCGATGGAGCATGGCTATATTGTGCTGCTCGGTGATAGTGGTCTACAGAAACGACGTGAAAGCTCATT
TGTTAACTTGGTTTTCACTAAACAAGCTGATGGCATGCTGTTGCTGGGCACTGATTTACCATTCGATGTCAGCAAACCAG
AACAAAAAAATCTACCGCCGATGGTGATGGCTTGTGAATATGCGCCTGAGCTTGAGCTGCCTACCGTGCATATTGATAAC
TTAACGTCTGCCTTTGAAGCCGTTAATTACCTTACTCAGATGGGCCATAAACGTATTGCCGAAATTTCTGGACCAGAGAG
TGCGGCATTGTGTCATTTCCGCCATCAAGGTTATCAGCAAGCTCTGCGTCGAGCGGGCTTGACAATGAACCCTGCCTATC
GCGCATTTGGCGACTTTACCTTTGAAGCCGGGGCGCTAGCGGTTCGTCAGCTATTGGCCCTGCCAGAACCTCCGACTGCG
ATATTTTGTCATAACGATGCGATGGCGATTGGGGCGATTCAACAAGCTAAAAAGCTTGGTTTGCGTGTGCCTCAGGATTT
GTCATTGGTGGGCTTTGATGACATTCAATTTGCTCAATTTTGCGATCCACCGTTGACGACGATCTCTCAGCCACGCTACG
AAATTGGTCGTCAAGCGATGTTGATGATGCTTGAGATTTTGCGTGGTCATGATGTACGAGCAGGTTCGCGTCTGCTGGAA
ACCACATTAGTAATACGTGAAAGTGCTGCACCACCGAGAGTGCTATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	91.265	99.104	0.904
cytR	Vibrio parahaemolyticus RIMD 2210633	85.586	99.403	0.851