Detailed information NTG0884379

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ViNHUV68_RS02290
• Genome accession: NZ_CP134975
• Coordinates: 470521..473904 (-)
• Length: 1127 a.a.
• NCBI ID: WP_391089112.1
• Uniprot ID: -
• Organism: Vibrio sp. NH-UV-68
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 465521..478904

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ViNHUV68_RS02275 (ViNHUV68_04590)	-	465994..467022 (-)	1029	WP_038173878.1	ABC transporter permease	-
ViNHUV68_RS02280 (ViNHUV68_04600)	-	467025..468011 (-)	987	WP_038173879.1	ABC transporter permease	-
ViNHUV68_RS02285 (ViNHUV68_04610)	-	468184..469866 (-)	1683	WP_391089110.1	ABC transporter substrate-binding protein	-
ViNHUV68_RS02290 (ViNHUV68_04620)	chiS	470521..473904 (-)	3384	WP_391089112.1	response regulator	Regulator
ViNHUV68_RS02295 (ViNHUV68_04630)	rsmC	474114..475136 (-)	1023	WP_038173882.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ViNHUV68_RS02300 (ViNHUV68_04640)	-	475209..476294 (-)	1086	WP_038173984.1	AI-2E family transporter	-
ViNHUV68_RS02305	-	476344..476511 (+)	168	WP_157631140.1	hypothetical protein	-
ViNHUV68_RS02310 (ViNHUV68_04650)	hemL	476572..477864 (-)	1293	WP_038173883.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ViNHUV68_RS02315 (ViNHUV68_04660)	erpA	478121..478462 (+)	342	WP_038173884.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1127 a.a.
• Molecular weight: 127226.01 Da
• Isoelectric Point: 6.1679

>NTDB_id=884379 ViNHUV68_RS02290 WP_391089112.1 470521..473904(-) (chiS) [Vibrio sp. NH-UV-68]
MFKLYRKQKFKRLQSTLMWAFLVLSITPLTIIAIFFLQSHTKDLQEQSTSHLVSVRDSKQQQVIDYLYAKESEVMGFVRS
ELAYASGGRFYGLVNAFSNLGLDIEQARKNAQQRYIQGSGDQIKTSILPQSSVFNGTERYRLLHKRYHWAYLELLKRSDF
DDVLLVDRDGNVTYSIYKHDNFATNLLTGRYKDNNLGQTFAKLRNLVNEKRKTNEDFTPVIISDFSAEDGKSVAWLGAPI
IQQGYLHSFAMFRLPNNGITKLIADDPNNPKRTLLVGSDHQSRSLAYQQQDIDKSKAVIDLALSGLTNVGTYSNTDNESI
IAAYSPISVKGIDWAIVVEVPEKVAFARVHQLETVFVFAMLIAILLVVMASHYLSNFITSPLLKLTWAAEKVSAGDLDAD
MINTQRKDEIGRLAVSFERMQRSIREKILLIKQQNKELESNIKLIQKQNDELQLANKLKDEFLATTSHELRTPLHGMVGI
AEALASGANGPITAEHKYQLDIIINSGQRLATLVDDLLDYHKMRYGNLDIETCAVDLAGSTRLVLELSSHLLGNKPIRII
NQVPKDPVWVSADPQRLEQVLYNLVGNAIKYTSEGKIVISAGVIDDQIRVQVVDTGQGIPADQLENIFEPLIQAGNDSTR
YRQGAGLGLSISRQLIELMQGSLYVSSQPMVGTTFSFTLPLATQEQIQATHHYEAPHFKVPENNDIEFEEPTNLPENSNG
PLLLVVDDEPVNLRVLDSFLRLEGYRVRTAKDGYEALEAINKEKPELMLLDIMMPGMSGYQVCETLRQTYDHAELPIIML
TALNQTDDRVRGFSVGANDYLPKPFNKQELAARIVAHLTASKAEQRRIENQQLQHELKQRAMVEAGLLETQGRLLEQLET
APEAIICVRDDNKIRFANEAASKLFKRSTEQLKRSTADEIIAPKFLNVEQEHYCGQIDIYVEDVRQHLSADILKLPPGSG
LRSMYIFNVGGGINMNRINNLETAIEALSSFAFEGDRAKLQELKELGGEFTRLADRVAGDNKSKQEVMREVLVDAMTSAL
DYWESVTGQTKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRPETLPKTPRWRTVLSSLDYILEHCNEQSPERAHIEALKDK
LQHLLTS

Nucleotide

• Length: 3384 bp

>NTDB_id=884379 ViNHUV68_RS02290 WP_391089112.1 470521..473904(-) (chiS) [Vibrio sp. NH-UV-68]
ATGTTTAAGTTGTATCGAAAGCAGAAATTTAAGCGTCTGCAAAGTACGTTAATGTGGGCGTTTTTGGTCTTGAGTATTAC
CCCACTTACCATCATTGCGATCTTTTTCTTGCAGTCCCATACCAAGGATCTTCAAGAGCAGAGCACCTCGCACCTAGTGT
CAGTGCGCGACAGCAAGCAGCAGCAGGTGATTGATTACTTATATGCCAAAGAATCTGAGGTGATGGGCTTCGTCCGCTCT
GAACTTGCGTATGCCAGTGGTGGTCGTTTCTATGGTTTGGTCAATGCGTTTAGTAATTTAGGCTTAGATATTGAACAAGC
GCGTAAAAACGCTCAGCAGCGCTACATCCAAGGCTCAGGGGACCAAATTAAAACCTCGATACTGCCACAATCGAGCGTAT
TTAATGGTACAGAACGCTACCGTTTGTTGCACAAACGCTACCATTGGGCCTATCTAGAACTGCTCAAACGTTCTGACTTT
GATGACGTCTTACTCGTCGATCGCGATGGTAACGTAACTTACTCCATCTACAAGCATGACAATTTTGCCACCAATCTACT
TACTGGCCGTTATAAAGATAACAACCTTGGTCAAACCTTTGCCAAACTGCGCAATCTTGTTAATGAAAAACGTAAGACCA
ACGAAGATTTCACGCCAGTGATCATCTCTGACTTTTCAGCCGAAGACGGTAAATCGGTCGCTTGGCTTGGCGCCCCAATC
ATTCAACAAGGTTACCTGCACAGTTTTGCCATGTTCCGCTTACCAAACAACGGCATTACCAAACTCATCGCCGATGATCC
GAATAATCCCAAACGCACTTTATTGGTTGGCAGTGACCATCAATCGCGTTCGCTTGCTTATCAGCAGCAAGATATTGATA
AGAGTAAAGCCGTCATTGATTTAGCGCTATCAGGCCTGACCAATGTGGGGACCTATTCGAATACTGACAATGAGTCTATC
ATTGCGGCCTATAGCCCGATTTCCGTCAAAGGCATTGACTGGGCGATCGTCGTCGAAGTGCCAGAGAAAGTTGCCTTTGC
TCGTGTGCACCAACTTGAAACCGTGTTTGTCTTTGCCATGCTTATTGCTATTTTGCTGGTTGTGATGGCATCACACTACT
TATCTAACTTTATTACTTCTCCTTTGCTCAAATTAACCTGGGCTGCAGAGAAAGTCTCGGCGGGCGATCTTGATGCCGAT
ATGATCAACACCCAGCGTAAAGATGAGATTGGCCGCCTAGCGGTCAGCTTTGAACGTATGCAGCGCTCTATCCGAGAAAA
AATCCTGCTCATCAAACAACAAAACAAAGAGCTAGAAAGTAACATTAAGTTGATTCAAAAGCAGAATGACGAGCTGCAAC
TGGCCAATAAACTCAAAGATGAATTCCTTGCGACCACCTCGCACGAGTTACGTACGCCACTGCACGGCATGGTGGGAATT
GCTGAAGCGTTAGCCTCTGGCGCCAATGGACCAATAACAGCCGAGCACAAATATCAACTCGACATTATTATTAACAGTGG
CCAGCGTTTGGCGACCTTAGTTGACGACTTACTTGATTATCACAAAATGCGCTATGGCAATTTAGACATCGAAACCTGCG
CCGTTGATCTAGCCGGATCGACCCGCTTGGTTTTGGAGCTATCGTCACACCTACTGGGTAATAAGCCCATTCGAATAATC
AACCAAGTGCCAAAAGATCCCGTTTGGGTCAGCGCGGATCCGCAGCGTCTTGAGCAAGTGCTGTATAACCTGGTTGGTAA
TGCGATCAAATACACCAGTGAAGGCAAAATTGTCATCTCTGCCGGTGTGATCGATGATCAAATCCGCGTGCAGGTGGTCG
ATACTGGCCAAGGGATTCCCGCCGATCAACTTGAGAACATCTTTGAACCCTTAATTCAAGCGGGCAATGATTCAACCCGT
TATCGTCAAGGAGCGGGGTTAGGTCTGTCCATTAGCCGTCAATTGATCGAATTAATGCAAGGCTCATTGTATGTGAGTAG
TCAGCCAATGGTTGGCACCACCTTTAGTTTTACACTACCGTTGGCTACGCAAGAGCAAATCCAAGCAACTCACCACTATG
AAGCGCCGCACTTTAAAGTACCAGAAAATAACGACATCGAGTTCGAAGAACCAACTAACTTACCAGAGAACAGTAACGGC
CCACTGCTACTGGTGGTTGATGACGAACCCGTAAACCTACGTGTCCTTGATAGCTTCCTACGCCTTGAAGGGTATCGTGT
TCGCACCGCTAAAGATGGTTATGAAGCGCTTGAGGCGATCAATAAGGAAAAACCTGAACTGATGCTGCTCGATATCATGA
TGCCTGGCATGAGTGGCTATCAAGTGTGTGAGACGCTACGTCAAACCTATGATCACGCTGAGTTACCGATCATCATGCTT
ACCGCGCTAAATCAGACCGATGACCGTGTGCGCGGATTCAGTGTTGGCGCAAATGACTATTTGCCTAAACCATTCAATAA
ACAAGAACTAGCGGCGCGTATCGTTGCTCATCTCACGGCGAGCAAAGCCGAGCAACGCCGTATTGAAAATCAGCAGCTAC
AACACGAACTCAAGCAGCGTGCAATGGTAGAAGCGGGCTTGCTTGAAACTCAAGGCCGTCTGCTCGAGCAATTAGAGACA
GCACCTGAAGCGATTATTTGTGTTCGCGACGATAACAAGATTCGCTTTGCCAACGAAGCCGCCTCGAAACTGTTCAAACG
TTCTACAGAACAACTCAAACGCTCAACCGCTGATGAGATCATCGCTCCTAAGTTCCTCAATGTTGAACAAGAACACTATT
GTGGCCAAATCGATATCTATGTTGAAGATGTCAGACAGCACCTCTCGGCAGATATTCTCAAATTACCCCCGGGCTCTGGA
TTACGCTCAATGTATATCTTTAATGTCGGCGGCGGCATTAATATGAACCGCATCAACAACCTCGAAACCGCAATCGAAGC
GCTATCCAGCTTTGCATTTGAAGGCGACCGAGCGAAGCTACAGGAATTGAAAGAGCTCGGCGGTGAGTTTACCCGTTTGG
CTGATCGTGTCGCGGGTGACAACAAATCCAAGCAAGAAGTGATGCGTGAGGTACTGGTTGATGCGATGACCAGCGCTTTG
GATTACTGGGAGTCGGTGACAGGACAAACCAAATTTGCCTTTGCTGAGCAAAGTGGTCTGTGGCGCGTTTATCTTGATCG
CAGTACCTTACAAACAAGAACGCTCGACAAATACCTTCGACCAGAGACGCTACCAAAAACCCCACGCTGGCGAACGGTGC
TTAGCTCTCTCGATTACATTCTTGAGCATTGCAATGAGCAGAGCCCTGAGCGCGCCCACATCGAGGCGCTAAAAGATAAA
TTACAGCACTTACTGACGAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (724-834)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-682)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• HAMP domain (HAMP) (374-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	79.521	100	0.796