Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RND68_RS06830 | Genome accession | NZ_CP134882 |
| Coordinates | 1287790..1288089 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain 10-5-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1282790..1293089
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RND68_RS06790 (RND68_06790) | - | 1282851..1283054 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| RND68_RS06795 (RND68_06795) | - | 1283051..1284037 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RND68_RS06800 (RND68_06800) | - | 1284037..1284366 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RND68_RS06805 (RND68_06805) | - | 1284363..1284986 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RND68_RS06810 (RND68_06810) | comGA | 1285038..1286012 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RND68_RS06815 (RND68_06815) | comGB | 1285984..1287054 (+) | 1071 | WP_313293607.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RND68_RS06820 (RND68_06820) | comGC | 1287068..1287379 (+) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RND68_RS06825 (RND68_06825) | comGD | 1287357..1287803 (+) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RND68_RS06830 (RND68_06830) | comGE | 1287790..1288089 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RND68_RS06835 (RND68_06835) | comGF | 1288007..1288504 (+) | 498 | WP_001794055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RND68_RS06840 (RND68_06840) | - | 1288601..1288747 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| RND68_RS06845 (RND68_06845) | - | 1288737..1289261 (+) | 525 | WP_001015125.1 | shikimate kinase | - |
| RND68_RS06850 (RND68_06850) | gcvT | 1289420..1290511 (+) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RND68_RS06855 (RND68_06855) | gcvPA | 1290531..1291877 (+) | 1347 | WP_000019697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=884311 RND68_RS06830 WP_000844413.1 1287790..1288089(+) (comGE) [Staphylococcus aureus strain 10-5-1]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=884311 RND68_RS06830 WP_000844413.1 1287790..1288089(+) (comGE) [Staphylococcus aureus strain 10-5-1]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |