Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   RND68_RS00475 Genome accession   NZ_CP134882
Coordinates   107982..108869 (+) Length   295 a.a.
NCBI ID   WP_000143418.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 10-5-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 102982..113869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RND68_RS00445 (RND68_00445) - 103714..104475 (+) 762 WP_000323448.1 alpha/beta hydrolase family protein -
  RND68_RS00450 (RND68_00450) - 104720..105175 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  RND68_RS00455 (RND68_00455) - 105297..105398 (+) 102 WP_000731972.1 SE2200 family small protein -
  RND68_RS00460 (RND68_00460) - 105458..106882 (-) 1425 WP_000953743.1 alkaline phosphatase -
  RND68_RS00465 (RND68_00465) - 107080..107280 (+) 201 WP_000604727.1 hypothetical protein -
  RND68_RS00470 (RND68_00470) braR 107306..107971 (+) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  RND68_RS00475 (RND68_00475) braS 107982..108869 (+) 888 WP_000143418.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  RND68_RS00480 (RND68_00480) - 108977..109732 (+) 756 WP_000923764.1 ABC transporter ATP-binding protein -
  RND68_RS00485 (RND68_00485) - 109729..111729 (+) 2001 WP_000776744.1 ABC transporter permease -
  RND68_RS00490 (RND68_00490) - 112405..112518 (+) 114 WP_014937089.1 hypothetical protein -
  RND68_RS00495 (RND68_00495) - 112900..113160 (+) 261 WP_001791293.1 hypothetical protein -
  RND68_RS00500 (RND68_00500) - 113170..113667 (+) 498 WP_001065267.1 glutathione peroxidase -
  RND68_RS00505 (RND68_00505) - 113775..113867 (-) 93 WP_031774855.1 hypothetical protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34105.41 Da        Isoelectric Point: 5.8962

>NTDB_id=884288 RND68_RS00475 WP_000143418.1 107982..108869(+) (braS) [Staphylococcus aureus strain 10-5-1]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQFNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=884288 RND68_RS00475 WP_000143418.1 107982..108869(+) (braS) [Staphylococcus aureus strain 10-5-1]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAATTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATTCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99