Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   UXR56_RS09955 Genome accession   NZ_CP151129
Coordinates   2013255..2013995 (-) Length   246 a.a.
NCBI ID   WP_000216868.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN157     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2008255..2018995
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXR56_RS09930 (UXR56_09930) hemH 2009131..2010054 (-) 924 WP_000162881.1 ferrochelatase -
  UXR56_RS09935 (UXR56_09935) hemE 2010112..2011149 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  UXR56_RS09940 (UXR56_09940) - 2011139..2011249 (-) 111 WP_001790154.1 hypothetical protein -
  UXR56_RS09945 (UXR56_09945) traP 2011412..2011915 (+) 504 WP_000737975.1 signal transduction protein TRAP -
  UXR56_RS09950 (UXR56_09950) - 2012039..2013262 (-) 1224 WP_000551836.1 ABC transporter permease -
  UXR56_RS09955 (UXR56_09955) pptA 2013255..2013995 (-) 741 WP_000216868.1 ABC transporter ATP-binding protein Regulator
  UXR56_RS09960 (UXR56_09960) - 2014129..2014551 (+) 423 WP_000004981.1 HIT family protein -
  UXR56_RS09965 (UXR56_09965) - 2014693..2015058 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  UXR56_RS09970 (UXR56_09970) - 2015793..2016350 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  UXR56_RS09975 (UXR56_09975) - 2016555..2017517 (+) 963 WP_000782121.1 foldase protein PrsA -
  UXR56_RS09980 (UXR56_09980) yhaM 2017638..2018579 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27667.97 Da        Isoelectric Point: 4.6662

>NTDB_id=884112 UXR56_RS09955 WP_000216868.1 2013255..2013995(-) (pptA) [Staphylococcus aureus strain BSN157]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDHDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=884112 UXR56_RS09955 WP_000216868.1 2013255..2013995(-) (pptA) [Staphylococcus aureus strain BSN157]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCATATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACATATAGAGATGACAGCAATGGCATATGATATTGATCA
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGACTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTTGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545